RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 B4GALT6Q9UBX8 382 aa6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 DSEQ9UL01 958 aa6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 ZKSCAN5Q9Y2L8 839 aa6.5□□□□□ -1.37
SMCHD1-205ENST00000581383 NEMP1O14524 444 aa6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 KRT37O76014 449 aa6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 LRG1P02750 347 aa6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 ZNF20P17024 532 aa6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 MLLT6P55198 1093 aaPredicted RBP6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 IL2P60568 153 aa6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 PPP2CBP62714 309 aa6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 PPP2CAP67775 309 aa6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 DSG1Q02413 1049 aa6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 HABP4Q5JVS0 413 aaKnown RBP6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 PRR31Q5SQ13 230 aa6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 LHFPL2Q6ZUX7 228 aa6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 SH3RF2Q8TEC5 729 aa6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 GPR101Q96P66 508 aaPredicted RBP6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 CDK5RAP1Q96SZ6 601 aaKnown RBP6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 TTC1Q99614 292 aa6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 THG1LQ9NWX6 298 aaKnown RBP6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 ASH2LQ9UBL3 628 aa6.49□□□□□ -1.37
SMCHD1-205ENST00000581383 MAN2B1O00754 1011 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 B4GALT3O60512 393 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 FSHBP01225 129 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 ATP2A2P16615 1042 aaKnown RBP6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 ID4P47928 161 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 GLRBP48167 497 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 ZXDAP98168 799 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 FAM50AQ14320 339 aaKnown RBP6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 STAT4Q14765 748 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 ARHGAP44Q17R89 818 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 ZNF568Q3ZCX4 644 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 PHF19Q5T6S3 580 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 CYP4F22Q6NT55 531 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 SMC1BQ8NDV3 1235 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 WDR66Q8TBY9 1149 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 SH3RF3Q8TEJ3 882 aaPredicted RBP6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 CHTF18Q8WVB6 975 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 CD244Q9BZW8 370 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 IFT22Q9H7X7 185 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 HOMER2Q9NSB8 354 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 DDX56Q9NY93 547 aaKnown RBP6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 SRRDQ9UH36 339 aa6.48□□□□□ -1.37
SMCHD1-205ENST00000581383 SLC12A8A0AV02 714 aa6.47□□□□□ -1.37
SMCHD1-205ENST00000581383 BRINP1O60477 761 aa6.47□□□□□ -1.37
SMCHD1-205ENST00000581383 BPIP17213 487 aa6.47□□□□□ -1.37
SMCHD1-205ENST00000581383 NFATC3Q12968 1075 aa6.47□□□□□ -1.37
SMCHD1-205ENST00000581383 ZNF585AQ6P3V2 769 aa6.47□□□□□ -1.37
SMCHD1-205ENST00000581383 IFNL2Q8IZJ0 200 aa6.47□□□□□ -1.37
SMCHD1-205ENST00000581383 KLHL36Q8N4N3 616 aa6.47□□□□□ -1.37
SMCHD1-205ENST00000581383 STAG1Q8WVM7 1258 aa6.47□□□□□ -1.37
SMCHD1-205ENST00000581383 YTHDC1Q96MU7 727 aaKnown RBP6.47□□□□□ -1.37
SMCHD1-205ENST00000581383 DLL4Q9NR61 685 aa6.47□□□□□ -1.37
SMCHD1-205ENST00000581383 H2AFY2Q9P0M6 372 aaPredicted RBP6.47□□□□□ -1.37
SMCHD1-205ENST00000581383 RBPJLQ9UBG7 517 aa6.47□□□□□ -1.37
SMCHD1-205ENST00000581383 TCAF1Q9Y4C2 921 aa6.47□□□□□ -1.37
SMCHD1-205ENST00000581383 SCDO00767 359 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 ZEB2O60315 1214 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 RAB11FIP3O75154 756 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 FKBP9O95302 570 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 LTFP02788 710 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 ADCYAP1R1P41586 468 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 TMPRSS15P98073 1019 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 IRF9Q00978 393 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 TUSC3Q13454 348 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 FSTL4Q6MZW2 842 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 FKBP9P1Q75LS8 142 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 OTOP1Q7RTM1 612 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 RALYLQ86SE5 291 aaKnown RBP6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 PALM2Q8IXS6 379 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 UHMK1Q8TAS1 419 aaKnown RBP6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 IGDCC4Q8TDY8 1250 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 BOCQ9BWV1 1114 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 SPTLC3Q9NUV7 552 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 OXSMQ9NWU1 459 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 ARHGAP20Q9P2F6 1191 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 SRPK3Q9UPE1 567 aa6.46□□□□□ -1.38
SMCHD1-205ENST00000581383 GPR39O43194 453 aa6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 ENO2P09104 434 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 ZBTB48P10074 688 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 GUCY2FP51841 1108 aa6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 KPNA1P52294 538 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 SMAD2Q15796 467 aaKnown RBP6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 ATP13A4Q4VNC1 1196 aa6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 PAN2Q504Q3 1202 aaKnown RBP6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 HS1BP3Q53T59 392 aa6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 RNF219Q5W0B1 726 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 KCTD1Q719H9 257 aa6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 NLGN4XQ8N0W4 816 aa6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 CLEC4DQ8WXI8 215 aa6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 ZCCHC14Q8WYQ9 949 aaKnown RBP6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 SLC5A4Q9NY91 659 aa6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 PPP4R1LQ9P1A2 415 aa6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 TELO2Q9Y4R8 837 aa6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 ATP23Q9Y6H3 246 aa6.45□□□□□ -1.38
SMCHD1-205ENST00000581383 PHLDB1Q86UU1 1377 aa6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 ALG1L2C9J202 215 aa6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 H7C1D1 291 aa6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 GDF5P43026 501 aa6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 LSSP48449 732 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms