RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ITGA7Q13683 1181 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 UGCGQ16739 394 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 TRMT1LQ7Z2T5 733 aaKnown RBP15.92■□□□□ 0.14
SKA2-205ENST00000580541 NECAB2Q7Z6G3 386 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 TRIM50Q86XT4 487 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 RETREG2Q8NC44 543 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 PIGOQ8TEQ8 1089 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 LARP4BQ92615 738 aaKnown RBP15.92■□□□□ 0.14
SKA2-205ENST00000580541 KAT2BQ92831 832 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 DHX58Q96C10 678 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 TIGD1Q96MW7 591 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 PNMA5Q96PV4 448 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 PLIN2Q99541 437 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 CYP26B1Q9NR63 512 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 KCNG1Q9UIX4 513 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 LOXHD1Q8IVV2 1947 aa15.92■□□□□ 0.14
SKA2-205ENST00000580541 A0A1W2PQ45 241 aaPredicted RBP15.91■□□□□ 0.14
SKA2-205ENST00000580541 A0A1W2PQY0 241 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 GAS2O43903 313 aaKnown RBP15.91■□□□□ 0.14
SKA2-205ENST00000580541 GADD45BO75293 160 aaPredicted RBP15.91■□□□□ 0.14
SKA2-205ENST00000580541 DGAT1O75907 488 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 SSBP05455 408 aaKnown RBP eCLIP15.91■□□□□ 0.14
SKA2-205ENST00000580541 MYL1P05976 194 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 PLA2G4BP0C869 781 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 INSRRP14616 1297 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 ATP4AP20648 1035 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 TMOD1P28289 359 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 DNM2P50570 870 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 IRX5P78411 483 aaPredicted RBP15.91■□□□□ 0.14
SKA2-205ENST00000580541 TBC1D8BQ0IIM8 1120 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 ECM1Q16610 540 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 SKOR2Q2VWA4 1001 aaPredicted RBP15.91■□□□□ 0.14
SKA2-205ENST00000580541 NBPF20Q3BBV1 942 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 COL13A1Q5TAT6 717 aaPredicted RBP15.91■□□□□ 0.14
SKA2-205ENST00000580541 ANO5Q75V66 913 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 SESTD1Q86VW0 696 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 SYT2Q8N9I0 419 aaPredicted RBP15.91■□□□□ 0.14
SKA2-205ENST00000580541 CNNM3Q8NE01 707 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 SLC7A3Q8WY07 619 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 RAD54LQ92698 747 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 TIPINQ9BVW5 301 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 SENP6Q9GZR1 1112 aaPredicted RBP15.91■□□□□ 0.14
SKA2-205ENST00000580541 BHMT2Q9H2M3 363 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 MROH7Q68CQ1 1323 aa15.91■□□□□ 0.14
SKA2-205ENST00000580541 CENPFP49454 3210 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 FRMPD3Q5JV73 1810 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 C17orf102A2RUQ5 167 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 E9PMD0 336 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 SMIM10L2AP0DMW4 78 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 SMIM10L2BP0DMW5 78 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 RARRES1P49788 294 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 POLGP54098 1239 aaPredicted RBP15.9■□□□□ 0.14
SKA2-205ENST00000580541 CDC42EP1Q00587 391 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 GRIK4Q16099 956 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 MTERF2Q49AM1 385 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 FAM47CQ5HY64 1035 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 FMR1NBQ8N0W7 255 aaPredicted RBP15.9■□□□□ 0.14
SKA2-205ENST00000580541 ZNF710Q8N1W2 664 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 MCPH1Q8NEM0 835 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 TNMDQ9H2S6 317 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 C11orf49Q9H6J7 331 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 WRAP73Q9P2S5 460 aaPredicted RBP15.9■□□□□ 0.14
SKA2-205ENST00000580541 HTTP42858 3142 aa15.9■□□□□ 0.14
SKA2-205ENST00000580541 ARVCFO00192 962 aa15.89■□□□□ 0.13
SKA2-205ENST00000580541 STBD1O95210 358 aa15.89■□□□□ 0.13
SKA2-205ENST00000580541 KRT18P05783 430 aaKnown RBP15.89■□□□□ 0.13
SKA2-205ENST00000580541 PSMC6P62333 389 aa15.89■□□□□ 0.13
SKA2-205ENST00000580541 TARBP2Q15633 366 aaKnown RBP15.89■□□□□ 0.13
SKA2-205ENST00000580541 PADI6Q6TGC4 694 aa15.89■□□□□ 0.13
SKA2-205ENST00000580541 ELOA2Q8IYF1 753 aaPredicted RBP15.89■□□□□ 0.13
SKA2-205ENST00000580541 TNS4Q8IZW8 715 aa15.89■□□□□ 0.13
SKA2-205ENST00000580541 TCP11Q8WWU5 503 aa15.89■□□□□ 0.13
SKA2-205ENST00000580541 ABHD8Q96I13 439 aa15.89■□□□□ 0.13
SKA2-205ENST00000580541 HDAC6Q9UBN7 1215 aa15.89■□□□□ 0.13
SKA2-205ENST00000580541 GTF2IRD1Q9UHL9 959 aa15.89■□□□□ 0.13
SKA2-205ENST00000580541 NOD1Q9Y239 953 aa15.89■□□□□ 0.13
SKA2-205ENST00000580541 SCN10AQ9Y5Y9 1956 aa15.89■□□□□ 0.13
SKA2-205ENST00000580541 TLR3O15455 904 aaKnown RBP15.88■□□□□ 0.13
SKA2-205ENST00000580541 CYP11B2P19099 503 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 KLRC1P26715 233 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 SLC12A3P55017 1021 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 IGBP1P78318 339 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 MCM6Q14566 821 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 E2F4Q16254 413 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 LONRF3Q496Y0 759 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 C1orf53Q5VUE5 145 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 TAF2Q6P1X5 1199 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 KRBA2Q6ZNG9 492 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 RSPH3Q86UC2 560 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 ENGASEQ8NFI3 743 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 CCDC47Q96A33 483 aaKnown RBP15.88■□□□□ 0.13
SKA2-205ENST00000580541 GOLPH3LQ9H4A5 285 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 ATP6V0A4Q9HBG4 840 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 BLOC1S4Q9NUP1 217 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 SETD4Q9NVD3 440 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 KBTBD4Q9NVX7 518 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 SERTAD1Q9UHV2 236 aa15.88■□□□□ 0.13
SKA2-205ENST00000580541 A0A087X0B3 334 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 ZBTB39O15060 712 aa15.87■□□□□ 0.13
SKA2-205ENST00000580541 ASAP2O43150 1006 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms