RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 LZTS1Q9Y250 596 aa16.37■□□□□ 0.21
CSNK1D-213ENST00000580446 NRCAMQ92823 1304 aa16.37■□□□□ 0.21
CSNK1D-213ENST00000580446 LAG3P18627 525 aa16.36■□□□□ 0.21
CSNK1D-213ENST00000580446 PLCB3Q01970 1234 aa16.36■□□□□ 0.21
CSNK1D-213ENST00000580446 SEMA3FQ13275 785 aa16.36■□□□□ 0.21
CSNK1D-213ENST00000580446 SMC1AQ14683 1233 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-213ENST00000580446 N4BP2L1Q5TBK1 243 aaPredicted RBP16.36■□□□□ 0.21
CSNK1D-213ENST00000580446 GPR161Q8N6U8 529 aaKnown RBP16.36■□□□□ 0.21
CSNK1D-213ENST00000580446 ARHGEF3Q9NR81 526 aa16.36■□□□□ 0.21
CSNK1D-213ENST00000580446 ZMIZ1Q9ULJ6 1067 aa16.36■□□□□ 0.21
CSNK1D-213ENST00000580446 C1QTNF9BB2RNN3 333 aa16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 SLC30A4O14863 429 aa16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 DHX16O60231 1041 aaKnown RBP16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 GDF9O60383 454 aa16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 C1QTNF9P0C862 333 aa16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 KCNV1Q6PIU1 500 aa16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 KCNT2Q6UVM3 1135 aa16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 SIRT2Q8IXJ6 389 aa16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 ADGRF4Q8IZF3 695 aa16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 ATRIPQ8WXE1 791 aa16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 SECISBP2LQ93073 1101 aaKnown RBP16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 RTEL1Q9NZ71 1219 aa16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 GINS2Q9Y248 185 aa16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 TRPV2Q9Y5S1 764 aa16.35■□□□□ 0.21
CSNK1D-213ENST00000580446 CACNA1IQ9P0X4 2223 aa16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 SPDYE4A6NLX3 237 aa16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 NT5C1B-RDH14C9J2C7 533 aa16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 SPTLC1O15269 473 aa16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 SNHG28P0DPA3 235 aa16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 MYBP10242 640 aa16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 PMLP29590 882 aa16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 METTL7BQ6UX53 244 aa16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 FCHSD1Q86WN1 690 aa16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 PJA1Q8NG27 643 aa16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 TRAPPC12Q8WVT3 735 aa16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 ADAM2Q99965 735 aa16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 MRPL11Q9Y3B7 192 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-213ENST00000580446 SOBPA7XYQ1 873 aa16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 CXCL14O95715 111 aa16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 PROS1P07225 676 aa16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 CCND2P30279 289 aa16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 GBP2P32456 591 aaPredicted RBP16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 HSD17B4P51659 736 aa16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 CABP7Q86V35 215 aa16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 SLC44A3Q8N4M1 653 aa16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 ZNF558Q96NG5 402 aa16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 PPP1R16BQ96T49 567 aa16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 ZKSCAN3Q9BRR0 538 aa16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 DZANK1Q9NVP4 752 aa16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 MTF2Q9Y483 593 aaPredicted RBP16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 IGSF9BQ9UPX0 1349 aa16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 FANCMQ8IYD8 2048 aa16.33■□□□□ 0.2
CSNK1D-213ENST00000580446 DENND3A2RUS2 1198 aa16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 MBLAC1A4D2B0 266 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 MAST4O15021 2626 aa16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 LAMTOR5O43504 91 aa16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 TGFB3P10600 412 aa16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 TCF7P36402 384 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 KRT17Q04695 432 aa16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 VPS53Q5VIR6 699 aa16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 DCLRE1AQ6PJP8 1040 aa16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 GPR149Q86SP6 731 aa16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 EPC1Q9H2F5 836 aa16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 CDHR5Q9HBB8 845 aa16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 SPG21Q9NZD8 308 aa16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 IGSF9Q9P2J2 1179 aa16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 NOC2LQ9Y3T9 749 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-213ENST00000580446 ORC4O43929 436 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 PPP1R11O60927 126 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 SRFP11831 508 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 METAP2P50579 478 aaKnown RBP eCLIP16.31■□□□□ 0.25e-7■□□□□ 11
CSNK1D-213ENST00000580446 IER5Q5VY09 327 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 PHLDB3Q6NSJ2 640 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 STOX1Q6ZVD7 989 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 TMEM87AQ8NBN3 555 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 NETO1Q8TDF5 533 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 PANK1Q8TE04 598 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 SLC22A17Q8WUG5 538 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 CASD1Q96PB1 797 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 MYADMQ96S97 322 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 ATP6V0A4Q9HBG4 840 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 RNF19AQ9NV58 838 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 GMEB2Q9UKD1 530 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 PCDHGA2Q9Y5H1 932 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 PCDHA1Q9Y5I3 950 aa16.31■□□□□ 0.2
CSNK1D-213ENST00000580446 C9IYK1 514 aa16.3■□□□□ 0.2
CSNK1D-213ENST00000580446 M0QZ92 97 aa16.3■□□□□ 0.2
CSNK1D-213ENST00000580446 MRPS9P82933 396 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-213ENST00000580446 PTPN14Q15678 1187 aa16.3■□□□□ 0.2
CSNK1D-213ENST00000580446 LETM2Q2VYF4 491 aa16.3■□□□□ 0.2
CSNK1D-213ENST00000580446 TMEM173Q86WV6 379 aaPredicted RBP16.3■□□□□ 0.2
CSNK1D-213ENST00000580446 TMEM40Q8WWA1 233 aa16.3■□□□□ 0.2
CSNK1D-213ENST00000580446 CELF4Q9BZC1 486 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-213ENST00000580446 JMJD4Q9H9V9 463 aa16.3■□□□□ 0.2
CSNK1D-213ENST00000580446 ECHDC1Q9NTX5 307 aa16.3■□□□□ 0.2
CSNK1D-213ENST00000580446 PKD2L1Q9P0L9 805 aa16.3■□□□□ 0.2
CSNK1D-213ENST00000580446 FNDC1Q4ZHG4 1894 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-213ENST00000580446 DENND4AQ7Z401 1863 aa16.29■□□□□ 0.2
CSNK1D-213ENST00000580446 SPATA31C2B4DYI2 1134 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms