RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 TUBE1Q9UJT0 475 aa12.9□□□□□ -0.34
GGA3-206ENST00000578773 ANGPTL2Q9UKU9 493 aa12.9□□□□□ -0.34
GGA3-206ENST00000578773 LZTS1Q9Y250 596 aa12.9□□□□□ -0.34
GGA3-206ENST00000578773 C1QTNF9BB2RNN3 333 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 GDF9O60383 454 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 PPP1R11O60927 126 aaPredicted RBP12.89□□□□□ -0.35
GGA3-206ENST00000578773 SLC3A2P08195 630 aaKnown RBP12.89□□□□□ -0.35
GGA3-206ENST00000578773 C1QTNF9P0C862 333 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 CA8P35219 290 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 SPEM2Q0P670 501 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 PPFIA1Q13136 1202 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 PAK2Q13177 524 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 LPAL2Q16609 132 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 HSP90AB4PQ58FF6 505 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 ATAT1Q5SQI0 421 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 N4BP2L1Q5TBK1 243 aaPredicted RBP12.89□□□□□ -0.35
GGA3-206ENST00000578773 VPS53Q5VIR6 699 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 TSSK4Q6SA08 328 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 ADGRF4Q8IZF3 695 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 MRPL43Q8N983 215 aaKnown RBP12.89□□□□□ -0.35
GGA3-206ENST00000578773 TRAPPC12Q8WVT3 735 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 USP26Q9BXU7 913 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 NGRNQ9NPE2 291 aaKnown RBP12.89□□□□□ -0.35
GGA3-206ENST00000578773 ZMIZ1Q9ULJ6 1067 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 SIT1Q9Y3P8 196 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 PCDHB7Q9Y5E2 793 aa12.89□□□□□ -0.35
GGA3-206ENST00000578773 BPTFQ12830 3046 aa12.88□□□□□ -0.35
GGA3-206ENST00000578773 NRCAMQ92823 1304 aa12.88□□□□□ -0.35
GGA3-206ENST00000578773 IGSF9BQ9UPX0 1349 aa12.88□□□□□ -0.35
GGA3-206ENST00000578773 GREB1Q4ZG55 1949 aa12.88□□□□□ -0.35
GGA3-206ENST00000578773 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.88□□□□□ -0.35
GGA3-206ENST00000578773 MBLAC1A4D2B0 266 aaPredicted RBP12.88□□□□□ -0.35
GGA3-206ENST00000578773 SLC30A4O14863 429 aa12.88□□□□□ -0.35
GGA3-206ENST00000578773 MRPS9P82933 396 aaKnown RBP12.88□□□□□ -0.35
GGA3-206ENST00000578773 PPP4R3BQ5MIZ7 849 aa12.88□□□□□ -0.35
GGA3-206ENST00000578773 TAF2Q6P1X5 1199 aa12.88□□□□□ -0.35
GGA3-206ENST00000578773 KCNT2Q6UVM3 1135 aa12.88□□□□□ -0.35
GGA3-206ENST00000578773 PJA1Q8NG27 643 aa12.88□□□□□ -0.35
GGA3-206ENST00000578773 SLC22A17Q8WUG5 538 aa12.88□□□□□ -0.35
GGA3-206ENST00000578773 FTHL17Q9BXU8 183 aa12.88□□□□□ -0.35
GGA3-206ENST00000578773 CDHR5Q9HBB8 845 aa12.88□□□□□ -0.35
GGA3-206ENST00000578773 MTF2Q9Y483 593 aaPredicted RBP12.88□□□□□ -0.35
GGA3-206ENST00000578773 TRPV2Q9Y5S1 764 aa12.88□□□□□ -0.35
GGA3-206ENST00000578773 MTCL1Q9Y4B5 1905 aaKnown RBP12.88□□□□□ -0.35
GGA3-206ENST00000578773 MAST4O15021 2626 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 CYSRT1A8MQ03 144 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 NT5C1B-RDH14C9J2C7 533 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 ORC4O43929 436 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 LAG3P18627 525 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 CSTF1Q05048 431 aaKnown RBP12.87□□□□□ -0.35
GGA3-206ENST00000578773 SMC1AQ14683 1233 aaKnown RBP12.87□□□□□ -0.35
GGA3-206ENST00000578773 STOX1Q6ZVD7 989 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 SLC44A3Q8N4M1 653 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 TMEM40Q8WWA1 233 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 ACSF2Q96CM8 615 aaPredicted RBP12.87□□□□□ -0.35
GGA3-206ENST00000578773 NACAP1Q9BZK3 213 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 EPC1Q9H2F5 836 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 VAT1LQ9HCJ6 419 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 ARHGEF3Q9NR81 526 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 TOMM22Q9NS69 142 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 PNMA2Q9UL42 364 aa12.87□□□□□ -0.35
GGA3-206ENST00000578773 C9IYK1 514 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 SPTLC1O15269 473 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 LILRB5O75023 590 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 PROS1P07225 676 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 NFX1Q12986 1120 aaKnown RBP12.86□□□□□ -0.35
GGA3-206ENST00000578773 PHLDB3Q6NSJ2 640 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 KCNV1Q6PIU1 500 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 METTL7BQ6UX53 244 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 CCDC149Q6ZUS6 474 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 OTOP3Q7RTS5 596 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 GPR149Q86SP6 731 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 TMEM173Q86WV6 379 aaPredicted RBP12.86□□□□□ -0.35
GGA3-206ENST00000578773 MCF2L2Q86YR7 1114 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 GPR161Q8N6U8 529 aaKnown RBP12.86□□□□□ -0.35
GGA3-206ENST00000578773 CASD1Q96PB1 797 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 MYADMQ96S97 322 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 ADAM2Q99965 735 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 ZKSCAN3Q9BRR0 538 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 JMJD4Q9H9V9 463 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 SPATA6Q9NWH7 488 aaPredicted RBP12.86□□□□□ -0.35
GGA3-206ENST00000578773 RTEL1Q9NZ71 1219 aa12.86□□□□□ -0.35
GGA3-206ENST00000578773 ZNF215Q9UL58 517 aaPredicted RBP12.86□□□□□ -0.35
GGA3-206ENST00000578773 NOC2LQ9Y3T9 749 aaKnown RBP12.86□□□□□ -0.35
GGA3-206ENST00000578773 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.85□□□□□ -0.35
GGA3-206ENST00000578773 SOBPA7XYQ1 873 aa12.85□□□□□ -0.35
GGA3-206ENST00000578773 CXCL14O95715 111 aa12.85□□□□□ -0.35
GGA3-206ENST00000578773 FGRP09769 529 aa12.85□□□□□ -0.35
GGA3-206ENST00000578773 MYBP10242 640 aa12.85□□□□□ -0.35
GGA3-206ENST00000578773 TGFB3P10600 412 aa12.85□□□□□ -0.35
GGA3-206ENST00000578773 CCND2P30279 289 aa12.85□□□□□ -0.35
GGA3-206ENST00000578773 TCF7P36402 384 aaPredicted RBP12.85□□□□□ -0.35
GGA3-206ENST00000578773 GHRHRQ02643 423 aa12.85□□□□□ -0.35
GGA3-206ENST00000578773 RSPH3Q86UC2 560 aa12.85□□□□□ -0.35
GGA3-206ENST00000578773 FTSJ3Q8IY81 847 aaKnown RBP12.85□□□□□ -0.35
GGA3-206ENST00000578773 SLC39A11Q8N1S5 342 aa12.85□□□□□ -0.35
GGA3-206ENST00000578773 ZBTB44Q8NCP5 570 aa12.85□□□□□ -0.35
GGA3-206ENST00000578773 PANK1Q8TE04 598 aa12.85□□□□□ -0.35
GGA3-206ENST00000578773 BCL7CQ8WUZ0 217 aaPredicted RBP12.85□□□□□ -0.35
GGA3-206ENST00000578773 PUF60Q9UHX1 559 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms