RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 MUTP22033 750 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 UBA7P41226 1012 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 KRT76Q01546 638 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 SP2Q02086 613 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 PRKCZQ05513 592 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 TTLL4Q14679 1199 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 ZNF746Q6NUN9 644 aaPredicted RBP8.99□□□□□ -0.97
COPS3-215ENST00000578317 SEPT14Q6ZU15 432 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 ENGASEQ8NFI3 743 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 CD99L2Q8TCZ2 262 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 HSD17B14Q9BPX1 270 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 SDF4Q9BRK5 362 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 TEKT3Q9BXF9 490 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 C1QTNF2Q9BXJ5 285 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 FAM13BQ9NYF5 915 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 FLRT1Q9NZU1 646 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 GABRQQ9UN88 632 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 KIAA1024Q9UPX6 916 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 CENPFP49454 3210 aa8.99□□□□□ -0.97
COPS3-215ENST00000578317 SOWAHDA6NJG2 315 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 NKRFO15226 690 aaKnown RBP eCLIP8.98□□□□□ -0.97
COPS3-215ENST00000578317 ZNF865P0CJ78 1059 aaPredicted RBP8.98□□□□□ -0.97
COPS3-215ENST00000578317 RPA1P27694 616 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 SFNP31947 248 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 WNT7BP56706 349 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 FAM160A1Q05DH4 1040 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 SNW1Q13573 536 aaKnown RBP8.98□□□□□ -0.97
COPS3-215ENST00000578317 EPHA7Q15375 998 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 KLHL40Q2TBA0 621 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 HYIQ5T013 277 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 MFSD14CQ5VZR4 134 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 KRT79Q5XKE5 535 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 METTL7BQ6UX53 244 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 USP49Q70CQ1 688 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 SMAP1Q8IYB5 467 aaPredicted RBP8.98□□□□□ -0.97
COPS3-215ENST00000578317 ELOA2Q8IYF1 753 aaPredicted RBP8.98□□□□□ -0.97
COPS3-215ENST00000578317 FMR1NBQ8N0W7 255 aaPredicted RBP8.98□□□□□ -0.97
COPS3-215ENST00000578317 GJA10Q969M2 543 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 EPSTI1Q96J88 318 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 MMTAG2Q9BU76 263 aaKnown RBP8.98□□□□□ -0.97
COPS3-215ENST00000578317 USP25Q9UHP3 1055 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 KCNH3Q9ULD8 1083 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 Q9Y3F1 56 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 DDX49Q9Y6V7 483 aaKnown RBP8.98□□□□□ -0.97
COPS3-215ENST00000578317 A0A1B0GVL5 298 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 WDR64B1ANS9 1081 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 SLITRK3O94933 977 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 TXNP10599 105 aaKnown RBP8.98□□□□□ -0.97
COPS3-215ENST00000578317 TXLNAP40222 546 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 SYKP43405 635 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 SERPINB4P48594 390 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 NDUFA8P51970 172 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 JAK3P52333 1124 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 LAMC2Q13753 1193 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 CCL14Q16627 93 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 DUSP28Q4G0W2 176 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 CELF3Q5SZQ8 465 aaKnown RBP8.98□□□□□ -0.97
COPS3-215ENST00000578317 HAUS3Q68CZ6 603 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 EEPD1Q7L9B9 569 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 CABP7Q86V35 215 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 FBXO16Q8IX29 292 aaPredicted RBP8.98□□□□□ -0.97
COPS3-215ENST00000578317 FSIP1Q8NA03 581 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 ERMNQ8TAM6 284 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 NEK9Q8TD19 979 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 GPT2Q8TD30 523 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 TIGD1Q96MW7 591 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 POLR3CQ9BUI4 534 aaPredicted RBP8.98□□□□□ -0.97
COPS3-215ENST00000578317 UNC45AQ9H3U1 944 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 JPH1Q9HDC5 661 aaPredicted RBP8.98□□□□□ -0.97
COPS3-215ENST00000578317 TUFT1Q9NNX1 390 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 PDGFCQ9NRA1 345 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 SLC9A2Q9UBY0 812 aa8.98□□□□□ -0.97
COPS3-215ENST00000578317 CDV3Q9UKY7 258 aaKnown RBP8.98□□□□□ -0.97
COPS3-215ENST00000578317 IGKV6D-21A0A0A0MT36 114 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 PP2D1A8MPX8 630 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 EML1O00423 815 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 FARP2O94887 1054 aaPredicted RBP8.97□□□□□ -0.97
COPS3-215ENST00000578317 ZNF202O95125 648 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 ARIH2O95376 493 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 CCNE2O96020 404 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 P4HBP07237 508 aaKnown RBP8.97□□□□□ -0.97
COPS3-215ENST00000578317 SPATA31C1P0DKV0 1188 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 XRCC6P12956 609 aaKnown RBP eCLIP8.97□□□□□ -0.97
COPS3-215ENST00000578317 PFKFB1P16118 471 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 LIG1P18858 919 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 UBA1P22314 1058 aaKnown RBP8.97□□□□□ -0.97
COPS3-215ENST00000578317 CDC25AP30304 524 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 CYP2C19P33261 490 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 SLC19A1P41440 591 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 USP4Q13107 963 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 LY6KQ17RY6 165 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 CCDC144BQ3MJ40 725 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 SPECC1Q5M775 1068 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 MAP3K21Q5TCX8 1036 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 ABHD15Q6UXT9 468 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 CCDC73Q6ZRK6 1079 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 CYFIP1Q7L576 1253 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 CATSPER3Q86XQ3 398 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 IQUBQ8NA54 791 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 TPCN2Q8NHX9 752 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms