RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 FRMPD4Q14CM0 1322 aa16.27■□□□□ 0.2
PPP4R1-206ENST00000577779 KLRF2D3W0D1 207 aa16.27■□□□□ 0.2
PPP4R1-206ENST00000577779 PLCB3Q01970 1234 aa16.27■□□□□ 0.2
PPP4R1-206ENST00000577779 NFX1Q12986 1120 aaKnown RBP16.27■□□□□ 0.2
PPP4R1-206ENST00000577779 TRAF1Q13077 416 aa16.27■□□□□ 0.2
PPP4R1-206ENST00000577779 RARS2Q5T160 578 aaKnown RBP16.27■□□□□ 0.2
PPP4R1-206ENST00000577779 HOMER1Q86YM7 354 aa16.27■□□□□ 0.2
PPP4R1-206ENST00000577779 EVI5LQ96CN4 794 aa16.27■□□□□ 0.2
PPP4R1-206ENST00000577779 CELF4Q9BZC1 486 aaKnown RBP16.27■□□□□ 0.2
PPP4R1-206ENST00000577779 CWH43Q9H720 699 aa16.27■□□□□ 0.2
PPP4R1-206ENST00000577779 DBR1Q9UK59 544 aaKnown RBP16.27■□□□□ 0.2
PPP4R1-206ENST00000577779 FBXL21Q9UKT6 434 aa16.27■□□□□ 0.2
PPP4R1-206ENST00000577779 DENND3A2RUS2 1198 aa16.26■□□□□ 0.19
PPP4R1-206ENST00000577779 RRN3P2A6NIE6 340 aa16.26■□□□□ 0.19
PPP4R1-206ENST00000577779 NT5C2P49902 561 aa16.26■□□□□ 0.19
PPP4R1-206ENST00000577779 ZNF589Q86UQ0 364 aaPredicted RBP16.26■□□□□ 0.19
PPP4R1-206ENST00000577779 SIX5Q8N196 739 aa16.26■□□□□ 0.19
PPP4R1-206ENST00000577779 SEPT1Q8WYJ6 367 aa16.26■□□□□ 0.19
PPP4R1-206ENST00000577779 SMARCAD1Q9H4L7 1026 aa16.26■□□□□ 0.19
PPP4R1-206ENST00000577779 ERVK-5Q9HDB9 667 aa16.26■□□□□ 0.19
PPP4R1-206ENST00000577779 CYP26B1Q9NR63 512 aa16.26■□□□□ 0.19
PPP4R1-206ENST00000577779 USTQ9Y2C2 406 aa16.26■□□□□ 0.19
PPP4R1-206ENST00000577779 BAZ2BQ9UIF8 2168 aaKnown RBP16.26■□□□□ 0.19
PPP4R1-206ENST00000577779 GSTTP1A0A1W2PQM5 241 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 STK25O00506 426 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 MGEA5O60502 916 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 INSRRP14616 1297 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 PDE4AP27815 886 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 KRT76Q01546 638 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 KRT17Q04695 432 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 TDGQ13569 410 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 SMC1AQ14683 1233 aaKnown RBP16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 RSPO4Q2I0M5 234 aaPredicted RBP16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 ATAT1Q5SQI0 421 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 KIAA1841Q6NSI8 718 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 SLC24A5Q71RS6 500 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 NLRX1Q86UT6 975 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 C12orf76Q8N812 135 aaPredicted RBP16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 RUBCNQ92622 972 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 ADAM2Q99965 735 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 C1orf112Q9NSG2 853 aa16.25■□□□□ 0.19
PPP4R1-206ENST00000577779 B4E1Z4 1266 aa16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 ZNF213O14771 459 aa16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 EOMESO95936 686 aa16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 FGFR1P11362 822 aa16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 PPM1AP35813 382 aa16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 PCNX4Q63HM2 1172 aa16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 KCNT2Q6UVM3 1135 aa16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 MRPL43Q8N983 215 aaKnown RBP16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 RIN2Q8WYP3 895 aaPredicted RBP16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 ACSF2Q96CM8 615 aaPredicted RBP16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 PIGSQ96S52 555 aa16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 ATP6V0A4Q9HBG4 840 aa16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 RGS18Q9NS28 235 aa16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 MAD2L2Q9UI95 211 aa16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 PCDHA2Q9Y5H9 948 aa16.24■□□□□ 0.19
PPP4R1-206ENST00000577779 KDM3AQ9Y4C1 1321 aa16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 C2orf71A6NGG8 1288 aa16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 CLASP2O75122 1294 aaKnown RBP16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 CA8P35219 290 aa16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 PBX3P40426 434 aa16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 NMIQ13287 307 aaPredicted RBP16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 XRRA1Q6P2D8 792 aa16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 ZC3H14Q6PJT7 736 aaKnown RBP16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 FAM43BQ6ZT52 329 aaPredicted RBP16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 DCLK2Q8N568 766 aa16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 ZNF558Q96NG5 402 aa16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 UBAC1Q9BSL1 405 aa16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 DZANK1Q9NVP4 752 aa16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 ZSWIM5Q9P217 1185 aa16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 DUSP12Q9UNI6 340 aa16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 GINS2Q9Y248 185 aa16.23■□□□□ 0.19
PPP4R1-206ENST00000577779 C9IYK1 514 aa16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 ATP9AO75110 1047 aa16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 RPS6KA5O75582 802 aa16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 KCNA2P16389 499 aa16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 RFX1P22670 979 aa16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 IFIT1BQ5T764 474 aaKnown RBP16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 KANK3Q6NY19 840 aa16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 NME8Q8N427 588 aa16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 TRAPPC12Q8WVT3 735 aa16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 TNPO1Q92973 898 aaKnown RBP16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 TMEM161AQ9NX61 479 aa16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 SPG21Q9NZD8 308 aa16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 NOC2LQ9Y3T9 749 aaKnown RBP16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 LAMA4Q16363 1823 aa16.22■□□□□ 0.19
PPP4R1-206ENST00000577779 SMIM35A0A1B0GVV1 85 aa16.21■□□□□ 0.19
PPP4R1-206ENST00000577779 ST3GAL2Q16842 350 aa16.21■□□□□ 0.19
PPP4R1-206ENST00000577779 ODR4Q5SWX8 454 aa16.21■□□□□ 0.19
PPP4R1-206ENST00000577779 C20orf194Q5TEA3 1177 aa16.21■□□□□ 0.19
PPP4R1-206ENST00000577779 LRRC55Q6ZSA7 311 aa16.21■□□□□ 0.19
PPP4R1-206ENST00000577779 OTOP3Q7RTS5 596 aa16.21■□□□□ 0.19
PPP4R1-206ENST00000577779 GPRASP2Q96D09 838 aa16.21■□□□□ 0.19
PPP4R1-206ENST00000577779 CDHR1Q96JP9 859 aa16.21■□□□□ 0.19
PPP4R1-206ENST00000577779 TMEM117Q9H0C3 514 aa16.21■□□□□ 0.19
PPP4R1-206ENST00000577779 PKD2L1Q9P0L9 805 aa16.21■□□□□ 0.19
PPP4R1-206ENST00000577779 CEP295Q9C0D2 2601 aa16.21■□□□□ 0.19
PPP4R1-206ENST00000577779 DENND4AQ7Z401 1863 aa16.2■□□□□ 0.18
PPP4R1-206ENST00000577779 FANCMQ8IYD8 2048 aa16.2■□□□□ 0.18
PPP4R1-206ENST00000577779 PNMA6FA0A0J9YX94 578 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms