RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 PPIL6Q8IXY8 311 aa4.24□□□□□ -1.73
TOP2A-202ENST00000577541 ZNF366Q8N895 744 aa4.24□□□□□ -1.73
TOP2A-202ENST00000577541 OR14K1Q8NGZ2 314 aa4.24□□□□□ -1.73
TOP2A-202ENST00000577541 FBXO10Q9UK96 956 aa4.24□□□□□ -1.73
TOP2A-202ENST00000577541 NUB1Q9Y5A7 615 aa4.24□□□□□ -1.73
TOP2A-202ENST00000577541 MYADML2A6NDP7 307 aa4.23□□□□□ -1.73
TOP2A-202ENST00000577541 SCG5P05408 212 aa4.23□□□□□ -1.73
TOP2A-202ENST00000577541 SNRPB2P08579 225 aaKnown RBP4.23□□□□□ -1.73
TOP2A-202ENST00000577541 MRE11P49959 708 aa4.23□□□□□ -1.73
TOP2A-202ENST00000577541 EIF6P56537 245 aaKnown RBP4.23□□□□□ -1.73
TOP2A-202ENST00000577541 EIF4HQ15056 248 aaKnown RBP4.23□□□□□ -1.73
TOP2A-202ENST00000577541 RABL3Q5HYI8 236 aa4.23□□□□□ -1.73
TOP2A-202ENST00000577541 TRIM68Q6AZZ1 485 aa4.23□□□□□ -1.73
TOP2A-202ENST00000577541 FILIP1Q7Z7B0 1213 aa4.23□□□□□ -1.73
TOP2A-202ENST00000577541 BEND2Q8NDZ0 799 aa4.23□□□□□ -1.73
TOP2A-202ENST00000577541 WASF1Q92558 559 aa4.23□□□□□ -1.73
TOP2A-202ENST00000577541 NELL1Q92832 810 aa4.23□□□□□ -1.73
TOP2A-202ENST00000577541 PPP1R14AQ96A00 147 aa4.23□□□□□ -1.73
TOP2A-202ENST00000577541 RSAD1Q9HA92 442 aa4.23□□□□□ -1.73
TOP2A-202ENST00000577541 EFR3BQ9Y2G0 817 aa4.23□□□□□ -1.73
TOP2A-202ENST00000577541 FRMD4BQ9Y2L6 1034 aa4.23□□□□□ -1.73
TOP2A-202ENST00000577541 CPP00450 1065 aa4.22□□□□□ -1.73
TOP2A-202ENST00000577541 NAT2P11245 290 aa4.22□□□□□ -1.73
TOP2A-202ENST00000577541 MEOX1P50221 254 aa4.22□□□□□ -1.73
TOP2A-202ENST00000577541 ZNF143P52747 638 aaPredicted RBP4.22□□□□□ -1.73
TOP2A-202ENST00000577541 TAP1Q03518 808 aa4.22□□□□□ -1.73
TOP2A-202ENST00000577541 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
TOP2A-202ENST00000577541 KCNV1Q6PIU1 500 aa4.22□□□□□ -1.73
TOP2A-202ENST00000577541 OTOP3Q7RTS5 596 aa4.22□□□□□ -1.73
TOP2A-202ENST00000577541 LRP10Q7Z4F1 713 aa4.22□□□□□ -1.73
TOP2A-202ENST00000577541 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.22□□□□□ -1.73
TOP2A-202ENST00000577541 GPR87Q9BY21 358 aa4.22□□□□□ -1.73
TOP2A-202ENST00000577541 CYP4F11Q9HBI6 524 aa4.22□□□□□ -1.73
TOP2A-202ENST00000577541 TRPS1Q9UHF7 1281 aa4.22□□□□□ -1.73
TOP2A-202ENST00000577541 PPFIA4O75335 1185 aa4.21□□□□□ -1.74
TOP2A-202ENST00000577541 COL6A2P12110 1019 aa4.21□□□□□ -1.74
TOP2A-202ENST00000577541 ADCY8P40145 1251 aa4.21□□□□□ -1.74
TOP2A-202ENST00000577541 RIN1Q13671 783 aa4.21□□□□□ -1.74
TOP2A-202ENST00000577541 SAFB2Q14151 953 aaKnown RBP eCLIP4.21□□□□□ -1.74
TOP2A-202ENST00000577541 PRR16Q569H4 304 aa4.21□□□□□ -1.74
TOP2A-202ENST00000577541 NBPF6Q5VWK0 638 aa4.21□□□□□ -1.74
TOP2A-202ENST00000577541 SP5Q6BEB4 398 aaPredicted RBP4.21□□□□□ -1.74
TOP2A-202ENST00000577541 CXXC5Q7LFL8 322 aaKnown RBP4.21□□□□□ -1.74
TOP2A-202ENST00000577541 Q8N9P0 234 aaPredicted RBP4.21□□□□□ -1.74
TOP2A-202ENST00000577541 UHMK1Q8TAS1 419 aaKnown RBP4.21□□□□□ -1.74
TOP2A-202ENST00000577541 NBPF4Q96M43 638 aa4.21□□□□□ -1.74
TOP2A-202ENST00000577541 CCDC140Q96MF4 163 aa4.21□□□□□ -1.74
TOP2A-202ENST00000577541 CDC42EP3Q9UKI2 254 aa4.21□□□□□ -1.74
TOP2A-202ENST00000577541 HS3ST4Q9Y661 456 aa4.21□□□□□ -1.74
TOP2A-202ENST00000577541 NKRFO15226 690 aaKnown RBP eCLIP4.2□□□□□ -1.74
TOP2A-202ENST00000577541 ZNF185O15231 689 aa4.2□□□□□ -1.74
TOP2A-202ENST00000577541 MSCO60682 206 aa4.2□□□□□ -1.74
TOP2A-202ENST00000577541 ATF4P18848 351 aaPredicted RBP4.2□□□□□ -1.74
TOP2A-202ENST00000577541 NASPP49321 788 aaPredicted RBP4.2□□□□□ -1.74
TOP2A-202ENST00000577541 DBPQ10586 325 aaPredicted RBP4.2□□□□□ -1.74
TOP2A-202ENST00000577541 VHLLQ6RSH7 139 aa4.2□□□□□ -1.74
TOP2A-202ENST00000577541 LRRC55Q6ZSA7 311 aa4.2□□□□□ -1.74
TOP2A-202ENST00000577541 RTKN2Q8IZC4 609 aa4.2□□□□□ -1.74
TOP2A-202ENST00000577541 C1orf159Q96HA4 380 aa4.2□□□□□ -1.74
TOP2A-202ENST00000577541 IGSF5Q9NSI5 407 aa4.2□□□□□ -1.74
TOP2A-202ENST00000577541 CCDC9Q9Y3X0 531 aaKnown RBP4.2□□□□□ -1.74
TOP2A-202ENST00000577541 INSL6Q9Y581 213 aa4.2□□□□□ -1.74
TOP2A-202ENST00000577541 A0A1W2PRX2 142 aa4.19□□□□□ -1.74
TOP2A-202ENST00000577541 KCNJ6P48051 423 aa4.19□□□□□ -1.74
TOP2A-202ENST00000577541 PTH2RP49190 550 aa4.19□□□□□ -1.74
TOP2A-202ENST00000577541 EPHA5P54756 1037 aa4.19□□□□□ -1.74
TOP2A-202ENST00000577541 FAM169BQ8N8A8 192 aa4.19□□□□□ -1.74
TOP2A-202ENST00000577541 ACBD3Q9H3P7 528 aa4.19□□□□□ -1.74
TOP2A-202ENST00000577541 CCSER2Q9H7U1 834 aa4.19□□□□□ -1.74
TOP2A-202ENST00000577541 NPFFR2Q9Y5X5 522 aa4.19□□□□□ -1.74
TOP2A-202ENST00000577541 TCF3P15923 654 aa4.18□□□□□ -1.74
TOP2A-202ENST00000577541 ZFP36P26651 326 aaKnown RBP4.18□□□□□ -1.74
TOP2A-202ENST00000577541 IL13RA1P78552 427 aa4.18□□□□□ -1.74
TOP2A-202ENST00000577541 SMAD3P84022 425 aaKnown RBP4.18□□□□□ -1.74
TOP2A-202ENST00000577541 SPIRE1Q08AE8 756 aa4.18□□□□□ -1.74
TOP2A-202ENST00000577541 ACAP1Q15027 740 aa4.18□□□□□ -1.74
TOP2A-202ENST00000577541 PPP2R5EQ16537 467 aa4.18□□□□□ -1.74
TOP2A-202ENST00000577541 OTOP2Q7RTS6 562 aa4.18□□□□□ -1.74
TOP2A-202ENST00000577541 TMEM145Q8NBT3 493 aa4.18□□□□□ -1.74
TOP2A-202ENST00000577541 SPATA3Q8NHX4 192 aa4.18□□□□□ -1.74
TOP2A-202ENST00000577541 ANKS1AQ92625 1134 aa4.18□□□□□ -1.74
TOP2A-202ENST00000577541 RABGGTAQ92696 567 aa4.18□□□□□ -1.74
TOP2A-202ENST00000577541 FAM184BQ9ULE4 1060 aa4.18□□□□□ -1.74
TOP2A-202ENST00000577541 INPP5FQ9Y2H2 1132 aa4.18□□□□□ -1.74
TOP2A-202ENST00000577541 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.17□□□□□ -1.74
TOP2A-202ENST00000577541 C1RP00736 705 aa4.17□□□□□ -1.74
TOP2A-202ENST00000577541 STAT3P40763 770 aa4.17□□□□□ -1.74
TOP2A-202ENST00000577541 USP14P54578 494 aa4.17□□□□□ -1.74
TOP2A-202ENST00000577541 ELLP55199 621 aaPredicted RBP4.17□□□□□ -1.74
TOP2A-202ENST00000577541 FOXF2Q12947 444 aa4.17□□□□□ -1.74
TOP2A-202ENST00000577541 KCTD1Q719H9 257 aa4.17□□□□□ -1.74
TOP2A-202ENST00000577541 C16orf92Q96LL3 132 aa4.17□□□□□ -1.74
TOP2A-202ENST00000577541 TINF2Q9BSI4 451 aa4.17□□□□□ -1.74
TOP2A-202ENST00000577541 SPATA5L1Q9BVQ7 753 aa4.17□□□□□ -1.74
TOP2A-202ENST00000577541 SLC29A3Q9BZD2 475 aa4.17□□□□□ -1.74
TOP2A-202ENST00000577541 ARHGAP28Q9P2N2 729 aa4.17□□□□□ -1.74
TOP2A-202ENST00000577541 DSEQ9UL01 958 aa4.17□□□□□ -1.74
TOP2A-202ENST00000577541 A0A0G2JNJ9 132 aa4.16□□□□□ -1.74
TOP2A-202ENST00000577541 KLRG2A4D1S0 409 aaPredicted RBP4.16□□□□□ -1.74
TOP2A-202ENST00000577541 DNAJC9-AS1A6NH13 148 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms