RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CWH43Q9H720 699 aa11.59□□□□□ -0.55
NPLOC4-220ENST00000576940 ERVK-5Q9HDB9 667 aa11.59□□□□□ -0.55
NPLOC4-220ENST00000576940 JPH1Q9HDC5 661 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-220ENST00000576940 TSHZ2Q9NRE2 1034 aa11.59□□□□□ -0.55
NPLOC4-220ENST00000576940 RGS18Q9NS28 235 aa11.59□□□□□ -0.55
NPLOC4-220ENST00000576940 SLC9A2Q9UBY0 812 aa11.59□□□□□ -0.55
NPLOC4-220ENST00000576940 PCDHA6Q9UN73 950 aa11.59□□□□□ -0.55
NPLOC4-220ENST00000576940 ST3GAL5Q9UNP4 418 aa11.59□□□□□ -0.55
NPLOC4-220ENST00000576940 PCDHA8Q9Y5H6 950 aa11.59□□□□□ -0.55
NPLOC4-220ENST00000576940 PLXNA3P51805 1871 aa11.59□□□□□ -0.55
NPLOC4-220ENST00000576940 KDM3AQ9Y4C1 1321 aa11.59□□□□□ -0.55
NPLOC4-220ENST00000576940 FNDC1Q4ZHG4 1894 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 DENND3A2RUS2 1198 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 C9IYK1 514 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 PLEKHA8P1O95397 391 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 BRD1O95696 1058 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 ARP10275 920 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 ACTR2P61160 394 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 LRRC55Q6ZSA7 311 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 SLC24A5Q71RS6 500 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 PLPPR4Q7Z2D5 763 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 RALYLQ86SE5 291 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 NCOA7Q8NI08 942 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 CTCFLQ8NI51 663 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 MRPS27Q92552 414 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 TNPO1Q92973 898 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 PPP1R16BQ96T49 567 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 TCF25Q9BQ70 676 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 SPZ1Q9BXG8 430 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 RWDD1Q9H446 243 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 KCNH7Q9NS40 1196 aa11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 SEC63Q9UGP8 760 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 U3KPZ7 1027 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-220ENST00000576940 DCHS1Q96JQ0 3298 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 RIF1Q5UIP0 2472 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 PRR23AA6NEV1 266 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 SPDYE3A6NKU9 549 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 C2CD4DB7Z1M9 353 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 WEE2P0C1S8 567 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 RXRAP19793 462 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 SMARCA1P28370 1054 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 PBX3P40426 434 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 NUBP1P53384 320 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 FOXK2Q01167 660 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 PLCB3Q01970 1234 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 SART3Q15020 963 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 PDE12Q6L8Q7 609 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 KIAA0319LQ8IZA0 1049 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 ZNF654Q8IZM8 581 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 CCDC82Q8N4S0 544 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 MXRA8Q9BRK3 442 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 ATP6V0A4Q9HBG4 840 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 ENTPD7Q9NQZ7 604 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 C1orf112Q9NSG2 853 aa11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 PUF60Q9UHX1 559 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-220ENST00000576940 VPS13AQ96RL7 3174 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 GPR182O15218 404 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 ATG7O95352 703 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 ASGR2P07307 311 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 SRGAP2BP0DMP2 458 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 PDE4AP27815 886 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 NBL1P41271 181 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 FAM189BP81408 668 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 ITGB3BPQ13352 177 aaPredicted RBP11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 KANK3Q6NY19 840 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 KCNT2Q6UVM3 1135 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 TMC7Q7Z402 723 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 RAB11FIP4Q86YS3 637 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 RASGRP4Q8TDF6 673 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 PGBD1Q96JS3 809 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 MAP3K14Q99558 947 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 OSMRQ99650 979 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 POMKQ9H5K3 350 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 LY9Q9HBG7 655 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 NGRNQ9NPE2 291 aaKnown RBP11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 SORCS3Q9UPU3 1222 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 NR2E1Q9Y466 385 aa11.56□□□□□ -0.56
NPLOC4-220ENST00000576940 FSD2A1L4K1 749 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 DDX39AO00148 427 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 HOXB8P17481 243 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 LAG3P18627 525 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 KIF5BP33176 963 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 MTMR3Q13615 1198 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 COL9A3Q14050 684 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 KIZQ2M2Z5 673 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 TRMT1LQ7Z2T5 733 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 FRMD5Q7Z6J6 570 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 FAM228AQ86W67 206 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 MB21D2Q8IYB1 491 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 UBALD2Q8IYN6 164 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 C12orf76Q8N812 135 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 CASD1Q96PB1 797 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 LZTS2Q9BRK4 669 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 SDF4Q9BRK5 362 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 ADAM7Q9H2U9 754 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 AGO4Q9HCK5 861 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 TMEM161AQ9NX61 479 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 LIMD1Q9UGP4 676 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 LZTS1Q9Y250 596 aa11.55□□□□□ -0.56
NPLOC4-220ENST00000576940 HCFC2Q9Y5Z7 792 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms