RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 PI4KBQ9UBF8 816 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 MYH1P12882 1939 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 MYH4Q9Y623 1939 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 ANO9A1A5B4 782 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 GOLGA6L10A6NI86 522 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 TISP43B9A030 160 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 PPP1R11O60927 126 aaPredicted RBP9.29□□□□□ -0.92
RPAIN-215ENST00000575112 ZBTB7AO95365 584 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 EPB41P11171 864 aaKnown RBP9.29□□□□□ -0.92
RPAIN-215ENST00000575112 ITGA4P13612 1032 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 KRT5P13647 590 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 ALDH1B1P30837 517 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 ITGB3BPQ13352 177 aaPredicted RBP9.29□□□□□ -0.92
RPAIN-215ENST00000575112 COG2Q14746 738 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 ACCSLQ4AC99 568 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 CAPN12Q6ZSI9 719 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 NLGN1Q8N2Q7 840 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 EHBP1Q8NDI1 1231 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 BAP1Q92560 729 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 MMTAG2Q9BU76 263 aaKnown RBP9.29□□□□□ -0.92
RPAIN-215ENST00000575112 ADAM33Q9BZ11 813 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 CELF4Q9BZC1 486 aaKnown RBP9.29□□□□□ -0.92
RPAIN-215ENST00000575112 CCSER1Q9C0I3 900 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 COA1Q9GZY4 146 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 EPN3Q9H201 632 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 KLC4Q9NSK0 619 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 DDX20Q9UHI6 824 aaKnown RBP9.29□□□□□ -0.92
RPAIN-215ENST00000575112 ABCB11O95342 1321 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 TUBBP07437 444 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 ECHS1P30084 290 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 NF2P35240 595 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 SKOR1P84550 965 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 BYSLQ13895 437 aaKnown RBP9.29□□□□□ -0.92
RPAIN-215ENST00000575112 EPC2Q52LR7 807 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 FAM102BQ5T8I3 360 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 IQCEQ6IPM2 695 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 VPS36Q86VN1 386 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 TICAM2Q86XR7 235 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 TBC1D31Q96DN5 1066 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 NUP58Q9BVL2 599 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 GLIS2Q9BZE0 524 aaPredicted RBP9.29□□□□□ -0.92
RPAIN-215ENST00000575112 RAVER2Q9HCJ3 691 aaKnown RBP9.29□□□□□ -0.92
RPAIN-215ENST00000575112 GINS2Q9Y248 185 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 PTPN22Q9Y2R2 807 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 MYH3P11055 1940 aa9.29□□□□□ -0.92
RPAIN-215ENST00000575112 A0A087X0T9 212 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 FLOT1O75955 427 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 KIAA0754O94854 1291 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 FAM228BP0C875 321 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 SOX10P56693 466 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 RPS6KA1Q15418 735 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 SYDE2Q5VT97 1194 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 BARGINQ6ZT62 677 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 PEX26Q7Z412 305 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 PPM1KQ8N3J5 372 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 RETREG2Q8NC44 543 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 N4BP2L2Q92802 583 aaPredicted RBP9.28□□□□□ -0.92
RPAIN-215ENST00000575112 REEP2Q9BRK0 252 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 KIFC3Q9BVG8 833 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 DDX47Q9H0S4 455 aaKnown RBP9.28□□□□□ -0.92
RPAIN-215ENST00000575112 SLC24A3Q9HC58 644 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 ACP6Q9NPH0 428 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 GCNT4Q9P109 453 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 NR2E1Q9Y466 385 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 K7ENM7 598 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 PAX7P23759 505 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 SHMT1P34896 483 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 MDH1P40925 334 aaKnown RBP9.28□□□□□ -0.92
RPAIN-215ENST00000575112 GCLMP48507 274 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 TUBB4BP68371 445 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 GBP6Q6ZN66 633 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 CATSPER3Q86XQ3 398 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 CCDC50Q8IVM0 306 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 CYFIP2Q96F07 1278 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 ZNF577Q9BSK1 485 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 SPZ1Q9BXG8 430 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 CTTNBP2NLQ9P2B4 639 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 CCPG1Q9ULG6 757 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 USTQ9Y2C2 406 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 CENPFP49454 3210 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 FOXO6A8MYZ6 492 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 OPA1O60313 960 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 TNFAIP3P21580 790 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 MCM3P25205 808 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 MTM1Q13496 603 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 GPATCH4Q5T3I0 446 aaKnown RBP9.28□□□□□ -0.92
RPAIN-215ENST00000575112 GLYCTKQ8IVS8 523 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 CCDC170Q8IYT3 715 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 SPIRE2Q8WWL2 714 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 AK8Q96MA6 479 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 AGBL1Q96MI9 1066 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 ZNF341Q9BYN7 854 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 TIAM2Q8IVF5 1701 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 UBR2Q8IWV8 1755 aa9.28□□□□□ -0.92
RPAIN-215ENST00000575112 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.27□□□□□ -0.92
RPAIN-215ENST00000575112 NOL4O94818 638 aa9.27□□□□□ -0.92
RPAIN-215ENST00000575112 HSD17B3P37058 310 aa9.27□□□□□ -0.92
RPAIN-215ENST00000575112 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.92
RPAIN-215ENST00000575112 TRIP13Q15645 432 aaPredicted RBP9.27□□□□□ -0.92
RPAIN-215ENST00000575112 TEX2Q8IWB9 1127 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms