RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 CCDC175P0C221 793 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 CLEC17AQ6ZS10 378 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 CATSPER3Q86XQ3 398 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 CYP39A1Q9NYL5 469 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 RWDD2AQ9UIY3 292 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 SNHG28P0DPA3 235 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 LRRC63Q05C16 580 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 SLC9C1Q4G0N8 1177 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 AXDND1Q5T1B0 1012 aaPredicted RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 HAUS6Q7Z4H7 955 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 ENOX1Q8TC92 643 aaKnown RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 GCOM2Q9BZD3 368 aaPredicted RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 C2orf40Q9H1Z8 148 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 SUCLA2Q9P2R7 463 aaPredicted RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 HBP1O60381 514 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 COPB1P53618 953 aaKnown RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 PPP2R3AQ06190 1150 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 KLHL30Q0D2K2 578 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 PTPAQ15257 358 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 EXOC3L4Q17RC7 722 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 RDM1Q8NG50 284 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 ERO1AQ96HE7 468 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 SAMSN1Q9NSI8 373 aaKnown RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 MYO6Q9UM54 1294 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 NPHP3-ACAD11A0A0J9YXS1 232 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 ZNF233A6NK53 670 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 TGFB3P10600 412 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 ATF7P17544 494 aaPredicted RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 EEF1GP26641 437 aaKnown RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 CYP2C19P33261 490 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 PRCPP42785 496 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 PAFAH1B1P43034 410 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 SNW1Q13573 536 aaKnown RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 AFG1LQ8WV93 481 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 L3MBTL3Q96JM7 780 aaPredicted RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 FAM86B1E9PN63 330 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 IKBKBO14920 756 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 TLR3O15455 904 aaKnown RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 MAGEB2O15479 319 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 KRT86O43790 486 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 CTSHP09668 335 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 FAM86B2P0C5J1 330 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 CTNNA2P26232 953 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 HOXA7P31268 230 aaPredicted RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 CASQ1P31415 396 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 LY6KQ17RY6 165 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 ZNF568Q3ZCX4 644 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 LBX2Q6XYB7 198 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 EHBP1Q8NDI1 1231 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 CTNNBL1Q8WYA6 563 aaPredicted RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 ANKRD36BP1Q96IX9 119 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 NOX5Q96PH1 765 aa11.05□□□□□ -0.64
SMG6-213ENST00000573166 PURBQ96QR8 312 aaKnown RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 RPF1Q9H9Y2 349 aaKnown RBP11.05□□□□□ -0.64
SMG6-213ENST00000573166 IGKV6D-41A0A0C4DH26 115 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 PLA2G6O60733 806 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 STAT1P42224 750 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 PIK3CAP42336 1068 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 MEIS2O14770 477 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 CYP2C9P11712 490 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 NMT1P30419 496 aaKnown RBP11.04□□□□□ -0.64
SMG6-213ENST00000573166 YWHAEP62258 255 aaKnown RBP11.04□□□□□ -0.64
SMG6-213ENST00000573166 RRP1BQ14684 758 aaKnown RBP11.04□□□□□ -0.64
SMG6-213ENST00000573166 NOL9Q5SY16 702 aaKnown RBP11.04□□□□□ -0.64
SMG6-213ENST00000573166 PPP4R3CPQ6ZMV5 832 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 ANKRD23Q86SG2 305 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 PDCL2Q8N4E4 241 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 LRRC71Q8N4P6 559 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 IL17RAQ96F46 866 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 C4AP0C0L4 1744 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 CNTNAP1P78357 1384 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 PEX10O60683 326 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 TBC1D8O95759 1140 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 TFRCP02786 760 aaKnown RBP11.04□□□□□ -0.64
SMG6-213ENST00000573166 GJC1P36383 396 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 MYL7Q01449 175 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 MAN2A1Q16706 1144 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 Q4G0T1 1027 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 SFMBT2Q5VUG0 894 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 IQCEQ6IPM2 695 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 METTL7BQ6UX53 244 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 GPR142Q7Z601 462 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 METTL16Q86W50 562 aaKnown RBP11.04□□□□□ -0.64
SMG6-213ENST00000573166 CACTINQ8WUQ7 758 aaKnown RBP11.04□□□□□ -0.64
SMG6-213ENST00000573166 HPS3Q969F9 1004 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 REEP2Q9BRK0 252 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 POLR3CQ9BUI4 534 aaPredicted RBP11.04□□□□□ -0.64
SMG6-213ENST00000573166 PRDM5Q9NQX1 630 aaPredicted RBP11.04□□□□□ -0.64
SMG6-213ENST00000573166 GUCA1BQ9UMX6 200 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 UBR2Q8IWV8 1755 aa11.04□□□□□ -0.64
SMG6-213ENST00000573166 MYH3P11055 1940 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 MYMKA6NI61 221 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 DYNC1I1O14576 645 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 MXI1P50539 228 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 POLR2FP61218 127 aaKnown RBP11.03□□□□□ -0.64
SMG6-213ENST00000573166 TMEM62Q0P6H9 643 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 FUT2Q10981 343 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 EMC2Q15006 297 aa11.03□□□□□ -0.64
SMG6-213ENST00000573166 KNOP1Q1ED39 458 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms