RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 RUFY3Q7L099 469 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 OTOP2Q7RTS6 562 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 ZNF713Q8N859 430 aaPredicted RBP8.51□□□□□ -1.05
NUP88-205ENST00000572809 ZNF511Q8NB15 262 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 GIMAP8Q8ND71 665 aaPredicted RBP8.51□□□□□ -1.05
NUP88-205ENST00000572809 HERVK_113Q902F9 699 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 SENP7Q9BQF6 1050 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 ARHGAP9Q9BRR9 750 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 C16orf70Q9BSU1 422 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 KLF16Q9BXK1 252 aaPredicted RBP8.51□□□□□ -1.05
NUP88-205ENST00000572809 AGXT2Q9BYV1 514 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 MTIF3Q9H2K0 278 aaKnown RBP8.51□□□□□ -1.05
NUP88-205ENST00000572809 SEMA6BQ9H3T3 888 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 RIC8AQ9NPQ8 531 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 BARHL2Q9NY43 387 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 GTF2IRD1Q9UHL9 959 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 PCDHB9Q9Y5E1 797 aa8.51□□□□□ -1.05
NUP88-205ENST00000572809 SCN10AQ9Y5Y9 1956 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 H3BRB1 525 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 PRPF3O43395 683 aaKnown RBP8.5□□□□□ -1.05
NUP88-205ENST00000572809 ATP9AO75110 1047 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 F2P00734 622 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 FOSP01100 380 aaPredicted RBP8.5□□□□□ -1.05
NUP88-205ENST00000572809 PFKMP08237 780 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 RFC2P35250 354 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 C6orf118Q5T5N4 469 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 DEFB128Q7Z7B8 93 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 TEX2Q8IWB9 1127 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 CCDC155Q8N6L0 562 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 CAGE1Q8TC20 777 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 GPRASP2Q96D09 838 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 CDHR1Q96JP9 859 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 GLT8D2Q9H1C3 349 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 TUT1Q9H6E5 874 aaKnown RBP8.5□□□□□ -1.05
NUP88-205ENST00000572809 EHMT1Q9H9B1 1298 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 STXBP5LQ9Y2K9 1186 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 UBIAD1Q9Y5Z9 338 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 CYP46A1Q9Y6A2 500 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 SZT2Q5T011 3432 aa8.5□□□□□ -1.05
NUP88-205ENST00000572809 GRXCR1A8MXD5 290 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 STXBP3O00186 592 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 LGALS2P05162 132 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 SCG2P13521 617 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 ITGB5P18084 799 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 PDIA3P30101 505 aaKnown RBP8.49□□□□□ -1.05
NUP88-205ENST00000572809 ADCY7P51828 1080 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 EVCP57679 992 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 CCT2P78371 535 aaKnown RBP8.49□□□□□ -1.05
NUP88-205ENST00000572809 ZNF200P98182 395 aaPredicted RBP8.49□□□□□ -1.05
NUP88-205ENST00000572809 AKAP17AQ02040 695 aaKnown RBP8.49□□□□□ -1.05
NUP88-205ENST00000572809 PTK7Q13308 1070 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 MTMR1Q13613 665 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 PFKFB3Q16875 520 aaPredicted RBP8.49□□□□□ -1.05
NUP88-205ENST00000572809 UTP14CQ5TAP6 766 aaKnown RBP8.49□□□□□ -1.05
NUP88-205ENST00000572809 AFAP1L1Q8TED9 768 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 VWCEQ96DN2 955 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 CTAGE1Q96RT6 745 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 CDX2Q99626 313 aaPredicted RBP8.49□□□□□ -1.05
NUP88-205ENST00000572809 GPR20Q99678 358 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 MXRA8Q9BRK3 442 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 TM6SF1Q9BZW5 370 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 FTOQ9C0B1 505 aaKnown RBP eCLIP8.49□□□□□ -1.05
NUP88-205ENST00000572809 TTYH1Q9H313 450 aaPredicted RBP8.49□□□□□ -1.05
NUP88-205ENST00000572809 RNPEPQ9H4A4 650 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 JADE2Q9NQC1 790 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 CXXC1Q9P0U4 656 aaPredicted RBP8.49□□□□□ -1.05
NUP88-205ENST00000572809 SLC4A7Q9Y6M7 1214 aa8.49□□□□□ -1.05
NUP88-205ENST00000572809 TMEM265A0A087WTH1 108 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 C17orf102A2RUQ5 167 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 PARNO95453 639 aaKnown RBP8.48□□□□□ -1.05
NUP88-205ENST00000572809 GNAT1P11488 350 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 CKBP12277 381 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 ACTN1P12814 892 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 SELPP16109 830 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 KCNA2P16389 499 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 ZNF76P36508 570 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 SP4Q02446 784 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 AP3B2Q13367 1082 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 TOB2Q14106 344 aaPredicted RBP8.48□□□□□ -1.05
NUP88-205ENST00000572809 NTRK3Q16288 839 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 PKN1Q16512 942 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 MCTP2Q6DN12 878 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 CYP2W1Q8TAV3 490 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 ADAM32Q8TC27 787 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 CCDC12Q8WUD4 166 aaPredicted RBP8.48□□□□□ -1.05
NUP88-205ENST00000572809 SEPT1Q8WYJ6 367 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 DHX38Q92620 1227 aaKnown RBP8.48□□□□□ -1.05
NUP88-205ENST00000572809 PHKBQ93100 1093 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 TIFAQ96CG3 184 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 ZNF274Q96GC6 653 aaPredicted RBP8.48□□□□□ -1.05
NUP88-205ENST00000572809 PGBD1Q96JS3 809 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 GUCD1Q96NT3 240 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 PBX4Q9BYU1 374 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 ZMYND12Q9H0C1 365 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 ZNF576Q9H609 170 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 ZFAND3Q9H8U3 227 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 C6orf50Q9HD87 102 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 KCNH7Q9NS40 1196 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 PDRG1Q9NUG6 133 aa8.48□□□□□ -1.05
NUP88-205ENST00000572809 TMEM260Q9NX78 707 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms