RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 CEP170P1Q96L14 293 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 NIFKQ9BYG3 293 aaKnown RBP16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 CCSER1Q9C0I3 900 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 ANKEF1Q9NU02 776 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 FAM13BQ9NYF5 915 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 WRAP73Q9P2S5 460 aaPredicted RBP16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 PRKAG2Q9UGJ0 569 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 TUBE1Q9UJT0 475 aa16.21■□□□□ 0.19
NPLOC4-209ENST00000572760 TMEM150BA6NC51 233 aa16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 MAGEB2O15479 319 aa16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 TREHO43280 583 aa16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 CLTBP09497 229 aa16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 CYP2C9P11712 490 aa16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 KLRC1P26715 233 aa16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 TBC1D8BQ0IIM8 1120 aa16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 ANO5Q75V66 913 aa16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 C7orf61Q8IZ16 206 aa16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 SH2D3AQ9BRG2 576 aa16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 MMTAG2Q9BU76 263 aaKnown RBP16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 PRDM5Q9NQX1 630 aaPredicted RBP16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 CYP26B1Q9NR63 512 aa16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 TMEM39AQ9NV64 488 aa16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 DNM3Q9UQ16 869 aa16.2■□□□□ 0.18
NPLOC4-209ENST00000572760 ARHGEF35A5YM69 484 aa16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 ZBTB39O15060 712 aa16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 STBD1O95210 358 aa16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 NPEPPSP55786 919 aa16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 KARSQ15046 597 aaKnown RBP16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 ECM1Q16610 540 aa16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 MTHFD1LQ6UB35 978 aa16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 USP49Q70CQ1 688 aa16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 EXOC8Q8IYI6 725 aa16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 CCDC155Q8N6L0 562 aa16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 METTL13Q8N6R0 699 aa16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 RETREG2Q8NC44 543 aa16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 PNMA5Q96PV4 448 aa16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 JPH2Q9BR39 696 aaPredicted RBP16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 PPME1Q9Y570 386 aa16.19■□□□□ 0.18
NPLOC4-209ENST00000572760 E9PMD0 336 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 CD4P01730 458 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 SSBP05455 408 aaKnown RBP eCLIP16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 TMOD1P28289 359 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 POLGP54098 1239 aaPredicted RBP16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 FAAP100Q0VG06 881 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 PTK7Q13308 1070 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 GRB10Q13322 594 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 HIC1Q14526 733 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 HYIQ5T013 277 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 AXDND1Q5T1B0 1012 aaPredicted RBP16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 RRAGBQ5VZM2 374 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 ADALQ6DHV7 355 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 TAF2Q6P1X5 1199 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 CCDC73Q6ZRK6 1079 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 RSPH3Q86UC2 560 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 KCTD17Q8N5Z5 321 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 SLC7A3Q8WY07 619 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 PANK2Q9BZ23 570 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 FAM49AQ9H0Q0 323 aaPredicted RBP16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 SUGCTQ9HAC7 445 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 DBR1Q9UK59 544 aaKnown RBP16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 PCDHA2Q9Y5H9 948 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 NR2E3Q9Y5X4 410 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 BRCA2P51587 3418 aa16.18■□□□□ 0.18
NPLOC4-209ENST00000572760 MBLAC1A4D2B0 266 aaPredicted RBP16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 EYA4O95677 639 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 PLCG1P19174 1290 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 HOXC8P31273 242 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 RFC5P40937 340 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 RARRES1P49788 294 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 RGS19P49795 217 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 ADAM17P78536 824 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 BFSP2Q13515 415 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 TARBP2Q15633 366 aaKnown RBP16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 MARCH8Q5T0T0 291 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 EFCAB12Q6NXP0 572 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 SHC4Q6S5L8 630 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 SERINC5Q86VE9 423 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 PDILTQ8N807 584 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 ZBTB10Q96DT7 871 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 BHMT2Q9H2M3 363 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 BMP2KQ9NSY1 1161 aaPredicted RBP16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 PDE4DIPQ5VU43 2346 aa16.17■□□□□ 0.18
NPLOC4-209ENST00000572760 ZBTB42B2RXF5 422 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 USO1O60763 962 aaKnown RBP16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 DGAT1O75907 488 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 C22orf31O95567 290 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 THPOP40225 353 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 STAT6P42226 847 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 DNM2P50570 870 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 DHX8Q14562 1220 aaKnown RBP16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 TMEM119Q4V9L6 283 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 RESP18Q5W5W9 173 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 PADI6Q6TGC4 694 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 DNAJB3Q8WWF6 145 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 GBP4Q96PP9 640 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 MAP7D2Q96T17 732 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 MTRQ99707 1265 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 PPP1R12CQ9BZL4 782 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 ATP6V0A4Q9HBG4 840 aa16.16■□□□□ 0.18
NPLOC4-209ENST00000572760 SMIM35A0A1B0GVV1 85 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms