RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 GRK6P43250 576 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 IREB2P48200 963 aaKnown RBP3.94□□□□□ -1.78
SMG6-208ENST00000570874 SOX9P48436 509 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 MAN2A2P49641 1150 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 MRE11P49959 708 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 LIMK1P53667 647 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 EVCP57679 992 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 HAND2P61296 217 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 MPP1Q00013 466 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 ACAP1Q15027 740 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 ANKRD1Q15327 319 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 SYCP1Q15431 976 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 TAF1CQ15572 869 aaPredicted RBP3.94□□□□□ -1.78
SMG6-208ENST00000570874 EZH2Q15910 746 aaKnown RBP3.94□□□□□ -1.78
SMG6-208ENST00000570874 PPP2R5EQ16537 467 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 C11orf91Q3C1V1 193 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 MAP7D1Q3KQU3 841 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 MCMDC2Q4G0Z9 681 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 GPR158Q5T848 1215 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 NUGGCQ68CJ6 796 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 ITPRIPL1Q6GPH6 555 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 RETSATQ6NUM9 610 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 OLFM4Q6UX06 510 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 BTNL9Q6UXG8 535 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 EP400NLQ6ZTU2 488 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 CHST3Q7LGC8 479 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 ADGRA1Q86SQ6 560 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 IQCA1Q86XH1 822 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 KRTAP1-3Q8IUG1 177 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 TEX11Q8IYF3 940 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 NECAB1Q8N987 351 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 ZSWIM2Q8NEG5 633 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 TPCN2Q8NHX9 752 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 LPIN2Q92539 896 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 TNPO1Q92973 898 aaKnown RBP3.94□□□□□ -1.78
SMG6-208ENST00000570874 RSRC1Q96IZ7 334 aaKnown RBP3.94□□□□□ -1.78
SMG6-208ENST00000570874 TSGA13Q96PP4 275 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 NCAPGQ9BPX3 1015 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 KATNAL1Q9BW62 490 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 LRRC2Q9BYS8 371 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 NIF3L1Q9GZT8 377 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 NYXQ9GZU5 481 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 ELAC1Q9H777 363 aaKnown RBP3.94□□□□□ -1.78
SMG6-208ENST00000570874 ZWILCHQ9H900 591 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 ZNF304Q9HCX3 659 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 FANCFQ9NPI8 374 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 MAN1C1Q9NR34 630 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 KCNQ5Q9NR82 932 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 TOPORSQ9NS56 1045 aaPredicted RBP3.94□□□□□ -1.78
SMG6-208ENST00000570874 KRT82Q9NSB4 513 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 RRN3Q9NYV6 651 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 AIPL1Q9NZN9 384 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 CHMP5Q9NZZ3 219 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 NFKBIL1Q9UBC1 381 aaPredicted RBP3.94□□□□□ -1.78
SMG6-208ENST00000570874 GJD2Q9UKL4 321 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 DUSP12Q9UNI6 340 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 MAPK8IP1Q9UQF2 711 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 TRAF3IP3Q9Y228 551 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 ZDHHC9Q9Y397 364 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 TRIM17Q9Y577 477 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 ZNF532Q9HCE3 1301 aa3.94□□□□□ -1.78
SMG6-208ENST00000570874 FSD2A1L4K1 749 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 FAM221AA4D161 298 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 FAM187AA6NFU0 413 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 GSG1L2A8MUP6 293 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 RASA4BC9J798 803 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 H0YC42 278 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 GPAA1O43292 621 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 PRKAB2O43741 272 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 FZD6O60353 706 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 DKC1O60832 514 aaKnown RBP eCLIP3.93□□□□□ -1.78
SMG6-208ENST00000570874 IDH1O75874 414 aaKnown RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 KRT38O76015 456 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 IL33O95760 270 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 CD4P01730 458 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 KRT1P04264 644 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 CYP17A1P05093 508 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 EEF2P13639 858 aaKnown RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 PDE6AP16499 860 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 CD9P21926 228 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 KCNJ4P48050 445 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 MXI1P50539 228 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 RCAN1P53805 252 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 CLNS1AP54105 237 aaKnown RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 RPS8P62241 208 aaKnown RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 RAC1P63000 192 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 ADCY1Q08828 1119 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 MTMR2Q13614 643 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 CUL4AQ13619 759 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 TOB2Q14106 344 aaPredicted RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 TRIM14Q14142 442 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 NAA30Q147X3 362 aaPredicted RBP3.93□□□□□ -1.78
SMG6-208ENST00000570874 RAB3GAP1Q15042 981 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 CLUL1Q15846 466 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 GRIK5Q16478 980 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 ME3Q16798 604 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 WDR44Q5JSH3 913 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 SLC27A3Q5K4L6 730 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 C10orf76Q5T2E6 689 aa3.93□□□□□ -1.78
SMG6-208ENST00000570874 LRCH2Q5VUJ6 765 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms