RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 CHADLQ6NUI6 762 aa24.89■■□□□ 1.58
VCPKMT-205ENST00000569518 TMEM139Q8IV31 216 aa24.89■■□□□ 1.58
VCPKMT-205ENST00000569518 CCDC60Q8IWA6 550 aaPredicted RBP24.89■■□□□ 1.58
VCPKMT-205ENST00000569518 CCDC112Q8NEF3 446 aa24.89■■□□□ 1.58
VCPKMT-205ENST00000569518 UBE4BO95155 1302 aa24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 IGSF9BQ9UPX0 1349 aa24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 LOC102724159A0A0B4J2E5 919 aa24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 PDXKO00764 312 aa24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 GYPCP04921 128 aa24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 SUPT20HL2P0C7V6 817 aa24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 NMT1P30419 496 aaKnown RBP24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 CCNA1P78396 465 aa24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 PWP2Q15269 919 aaKnown RBP24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 SWSAP1Q6NVH7 229 aa24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 CYFIP1Q7L576 1253 aa24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 ZNF720Q7Z2F6 126 aa24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 MPHOSPH6Q99547 160 aaKnown RBP24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 PTPN18Q99952 460 aa24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 TIPINQ9BVW5 301 aa24.89■■□□□ 1.57
VCPKMT-205ENST00000569518 ZMYM2Q9UBW7 1377 aa24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 SYNGAP1Q96PV0 1343 aa24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 DKC1O60832 514 aaKnown RBP eCLIP24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 TGFB3P10600 412 aa24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 KCNJ6P48051 423 aa24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 RBL2Q08999 1139 aa24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 ODR4Q5SWX8 454 aa24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 PLA2G4FQ68DD2 849 aa24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 MIS18BP1Q6P0N0 1132 aa24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 ANKRD13CQ8N6S4 541 aa24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 ZNF526Q8TF50 670 aaPredicted RBP24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 NOC4LQ9BVI4 516 aaKnown RBP24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 STRA6Q9BX79 667 aa24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 MCM3APO60318 1980 aa24.88■■□□□ 1.57
VCPKMT-205ENST00000569518 MYH9P35579 1960 aaKnown RBP24.87■■□□□ 1.57
VCPKMT-205ENST00000569518 USO1O60763 962 aaKnown RBP24.87■■□□□ 1.57
VCPKMT-205ENST00000569518 TPM2P07951 284 aa24.87■■□□□ 1.57
VCPKMT-205ENST00000569518 ADKP55263 362 aaKnown RBP24.87■■□□□ 1.57
VCPKMT-205ENST00000569518 MARSP56192 900 aaKnown RBP24.87■■□□□ 1.57
VCPKMT-205ENST00000569518 SP4Q02446 784 aa24.87■■□□□ 1.57
VCPKMT-205ENST00000569518 WDR78Q5VTH9 848 aa24.87■■□□□ 1.57
VCPKMT-205ENST00000569518 FAM178BQ8IXR5 827 aa24.87■■□□□ 1.57
VCPKMT-205ENST00000569518 TYW1Q9NV66 732 aaKnown RBP24.87■■□□□ 1.57
VCPKMT-205ENST00000569518 PLXNA1Q9UIW2 1896 aa24.87■■□□□ 1.57
VCPKMT-205ENST00000569518 AKR1B15C9JRZ8 316 aaPredicted RBP24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 PPP1R37O75864 691 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 FARP2O94887 1054 aaPredicted RBP24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 NPEPPSP55786 919 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 KCNA1Q09470 495 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 MAN2A1Q16706 1144 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 XKR9Q5GH70 373 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 PPFIBP1Q86W92 1011 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 CCDC43Q96MW1 224 aaKnown RBP24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 SH2D3AQ9BRG2 576 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 KCND1Q9NSA2 647 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 SORBS3O60504 671 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 MFAP3LO75121 409 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 GNA14O95837 355 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 HUNKP57058 714 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 TRIM14Q14142 442 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 PANX2Q96RD6 677 aa24.86■■□□□ 1.57
VCPKMT-205ENST00000569518 IGKV6D-21A0A0A0MT36 114 aa24.85■■□□□ 1.57
VCPKMT-205ENST00000569518 NRDCO43847 1150 aa24.85■■□□□ 1.57
VCPKMT-205ENST00000569518 MAPTP10636 758 aaKnown RBP24.85■■□□□ 1.57
VCPKMT-205ENST00000569518 PRKCEQ02156 737 aa24.85■■□□□ 1.57
VCPKMT-205ENST00000569518 NEDD9Q14511 834 aa24.85■■□□□ 1.57
VCPKMT-205ENST00000569518 VWA3BQ502W6 1294 aa24.85■■□□□ 1.57
VCPKMT-205ENST00000569518 ZC2HC1CQ53FD0 456 aaPredicted RBP24.85■■□□□ 1.57
VCPKMT-205ENST00000569518 OTUD6AQ7L8S5 288 aa24.85■■□□□ 1.57
VCPKMT-205ENST00000569518 ERGIC2Q96RQ1 377 aa24.85■■□□□ 1.57
VCPKMT-205ENST00000569518 PARK7Q99497 189 aaKnown RBP24.85■■□□□ 1.57
VCPKMT-205ENST00000569518 MAFBQ9Y5Q3 323 aaPredicted RBP24.85■■□□□ 1.57
VCPKMT-205ENST00000569518 TGFB1I1O43294 461 aa24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 CALUO43852 315 aaPredicted RBP24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 PLS3P13797 630 aa24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 CASP14P31944 242 aa24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 FXR1P51114 621 aaKnown RBP eCLIP24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 ADAM9Q13443 819 aa24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 STXBP4Q6ZWJ1 553 aa24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 DRC1Q96MC2 740 aa24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 NDST4Q9H3R1 872 aa24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 LARSQ9P2J5 1176 aaKnown RBP24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 PES1O00541 588 aaKnown RBP24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 NR2F2P24468 414 aa24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 TBC1D8BQ0IIM8 1120 aa24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 EEPD1Q7L9B9 569 aa24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 ABRAQ8N0Z2 381 aa24.84■■□□□ 1.57
VCPKMT-205ENST00000569518 CETN3O15182 167 aa24.83■■□□□ 1.57
VCPKMT-205ENST00000569518 ARIH2O95376 493 aa24.83■■□□□ 1.57
VCPKMT-205ENST00000569518 NFIL3Q16649 462 aa24.83■■□□□ 1.57
VCPKMT-205ENST00000569518 ZNF792Q3KQV3 632 aa24.83■■□□□ 1.57
VCPKMT-205ENST00000569518 KCNV1Q6PIU1 500 aa24.83■■□□□ 1.57
VCPKMT-205ENST00000569518 METTL7BQ6UX53 244 aa24.83■■□□□ 1.57
VCPKMT-205ENST00000569518 MAEAQ7L5Y9 396 aa24.83■■□□□ 1.57
VCPKMT-205ENST00000569518 RASAL3Q86YV0 1011 aa24.83■■□□□ 1.57
VCPKMT-205ENST00000569518 CNGA4Q8IV77 575 aa24.83■■□□□ 1.57
VCPKMT-205ENST00000569518 TRIM59Q8IWR1 403 aa24.83■■□□□ 1.57
VCPKMT-205ENST00000569518 DDX41Q9UJV9 622 aaKnown RBP24.83■■□□□ 1.57
VCPKMT-205ENST00000569518 PCDHB13Q9Y5F0 798 aa24.83■■□□□ 1.57
VCPKMT-205ENST00000569518 GSTTP1A0A1W2PQM5 241 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms