RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 VPS37CA5D8V6 355 aaPredicted RBP10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 RRN3P2A6NIE6 340 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 ZBTB39O15060 712 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 ZNF862O60290 1169 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 HBP1O60381 514 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 NEMFO60524 1076 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 VTNP04004 478 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 OATP04181 439 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 CLCN3P51790 818 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 JAK3P52333 1124 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 ADAM17P78536 824 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 DEFB103AP81534 67 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 TMEM266Q2M3C6 531 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 ZNF697Q5TEC3 545 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 LARP1BQ659C4 914 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 PPP4R3AQ6IN85 833 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 TRAF7Q6Q0C0 670 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 TPH2Q8IWU9 490 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 DYDC2Q96IM9 177 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 MBOAT7Q96N66 472 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 PBX4Q9BYU1 374 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 MTIF3Q9H2K0 278 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 TMEM60Q9H2L4 133 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 KCNMB3Q9NPA1 279 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 NRBP2Q9NSY0 501 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 VAV3Q9UKW4 847 aa10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 MAFBQ9Y5Q3 323 aaPredicted RBP10.15□□□□□ -0.78
GTF3C1-210ENST00000569394 POTEMA6NI47 508 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 M0QZ92 97 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 GCFC2P16383 781 aaKnown RBP10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 ATP2A2P16615 1042 aaKnown RBP10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 DNAJB2P25686 324 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 HOXC8P31273 242 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 SFNP31947 248 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 RFC2P35250 354 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 TECP42680 631 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 KCNJ6P48051 423 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 MCM2P49736 904 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 NPEPPSP55786 919 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 MRPS6P82932 125 aaKnown RBP10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 NFX1Q12986 1120 aaKnown RBP10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 ZNF484Q5JVG2 852 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 TTC38Q5R3I4 469 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 FOXD4L5Q5VV16 416 aaPredicted RBP10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 EFCAB12Q6NXP0 572 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 CNKSR3Q6P9H4 555 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 MOXD1Q6UVY6 613 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 RSPH3Q86UC2 560 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 FERMT3Q86UX7 667 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 NOSTRINQ8IVI9 506 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 MYOCDQ8IZQ8 938 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 FAM177A1Q8N128 213 aaPredicted RBP10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 PIP4P2Q8N4L2 257 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 FOXD4L4Q8WXT5 416 aaPredicted RBP10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 TNPO1Q92973 898 aaKnown RBP10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 FAM20AQ96MK3 541 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 SCLT1Q96NL6 688 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 NAP1L4Q99733 375 aaKnown RBP10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 ZBED2Q9BTP6 218 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 TTC12Q9H892 705 aaPredicted RBP10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 CDHR5Q9HBB8 845 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 WDR70Q9NW82 654 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 WRAP73Q9P2S5 460 aaPredicted RBP10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 MTUS1Q9ULD2 1270 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 PCDHA12Q9UN75 941 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 AKT3Q9Y243 479 aa10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 YBX2Q9Y2T7 364 aaKnown RBP10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.14□□□□□ -0.79
GTF3C1-210ENST00000569394 IGSF9BQ9UPX0 1349 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 SIP14410 1827 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 ZBTB42B2RXF5 422 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 CSDE1O75534 798 aaKnown RBP10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 PFKMP08237 780 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 CD52P31358 61 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 SLC26A2P50443 739 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 WDR5P61964 334 aaKnown RBP10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 IKBKEQ14164 716 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 LPIN1Q14693 890 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 KIZQ2M2Z5 673 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 TAF2Q6P1X5 1199 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 SEPT8Q92599 483 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 TIFAQ96CG3 184 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 FOXP1Q9H334 677 aaPredicted RBP10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 MSRAQ9UJ68 235 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 NOL7Q9UMY1 257 aaKnown RBP10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 KIF3AQ9Y496 699 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 PCDHB6Q9Y5E3 794 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 PCDHA2Q9Y5H9 948 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 TRPV2Q9Y5S1 764 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 LAMA3Q16787 3333 aa10.13□□□□□ -0.79
GTF3C1-210ENST00000569394 SZT2Q5T011 3432 aa10.12□□□□□ -0.79
GTF3C1-210ENST00000569394 PTPRSQ13332 1948 aa10.12□□□□□ -0.79
GTF3C1-210ENST00000569394 MBLAC1A4D2B0 266 aaPredicted RBP10.12□□□□□ -0.79
GTF3C1-210ENST00000569394 RFXAPO00287 272 aa10.12□□□□□ -0.79
GTF3C1-210ENST00000569394 C22orf31O95567 290 aa10.12□□□□□ -0.79
GTF3C1-210ENST00000569394 FGFR4P22455 802 aa10.12□□□□□ -0.79
GTF3C1-210ENST00000569394 QARSP47897 775 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms