RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ZNF558Q96NG5 402 aa9.97□□□□□ -0.81
SMG1-216ENST00000569122 CNTNAP3BQ96NU0 1288 aa9.97□□□□□ -0.81
SMG1-216ENST00000569122 ADAM2Q99965 735 aa9.97□□□□□ -0.81
SMG1-216ENST00000569122 CNTNAP3Q9BZ76 1288 aa9.97□□□□□ -0.81
SMG1-216ENST00000569122 TMEM117Q9H0C3 514 aa9.97□□□□□ -0.81
SMG1-216ENST00000569122 SPG21Q9NZD8 308 aa9.97□□□□□ -0.81
SMG1-216ENST00000569122 ZSWIM5Q9P217 1185 aa9.97□□□□□ -0.81
SMG1-216ENST00000569122 IGSF9Q9P2J2 1179 aa9.97□□□□□ -0.81
SMG1-216ENST00000569122 SUPT16HQ9Y5B9 1047 aaKnown RBP9.97□□□□□ -0.81
SMG1-216ENST00000569122 HCFC2Q9Y5Z7 792 aa9.97□□□□□ -0.81
SMG1-216ENST00000569122 CACNA1BQ00975 2339 aa9.97□□□□□ -0.81
SMG1-216ENST00000569122 TTC3P53804 2025 aa9.97□□□□□ -0.81
SMG1-216ENST00000569122 PALM3A6NDB9 673 aaPredicted RBP9.96□□□□□ -0.82
SMG1-216ENST00000569122 HIDE1A8MVS5 230 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 PPP1R11O60927 126 aaPredicted RBP9.96□□□□□ -0.82
SMG1-216ENST00000569122 KRT37O76014 449 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 IBSPP21815 317 aaPredicted RBP9.96□□□□□ -0.82
SMG1-216ENST00000569122 SLC26A2P50443 739 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 FAM189BP81408 668 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 TBC1D8BQ0IIM8 1120 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 FAM102BQ5T8I3 360 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 KIAA0319Q5VV43 1072 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 KCNT2Q6UVM3 1135 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 PPFIBP1Q86W92 1011 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 HOMER1Q86YM7 354 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 SIX5Q8N196 739 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 LRRC43Q8N309 656 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 STAG2Q8N3U4 1231 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 SECISBP2LQ93073 1101 aaKnown RBP9.96□□□□□ -0.82
SMG1-216ENST00000569122 FAM227BQ96M60 508 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 RIOX1Q9H6W3 641 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 CWH43Q9H720 699 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 WNT16Q9UBV4 365 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 STK39Q9UEW8 545 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 DUSP12Q9UNI6 340 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 PLXNA3P51805 1871 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 NLRC5Q86WI3 1866 aa9.96□□□□□ -0.82
SMG1-216ENST00000569122 GSTTP1A0A1W2PQM5 241 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 C2orf71A6NGG8 1288 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 C9IYK1 514 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 RBAK-RBAKDNI3L0D1 243 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 PI15O43692 258 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 CXCL14O95715 111 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 NPR3P17342 541 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 PDE4AP27815 886 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 GATMP50440 423 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 APOBRQ0VD83 1088 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 IMMTQ16891 758 aaKnown RBP9.95□□□□□ -0.82
SMG1-216ENST00000569122 RARS2Q5T160 578 aaKnown RBP9.95□□□□□ -0.82
SMG1-216ENST00000569122 CCDC149Q6ZUS6 474 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 PLPPR4Q7Z2D5 763 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 CABP7Q86V35 215 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 ZNF710Q8N1W2 664 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 NXPE3Q969Y0 559 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 TMX1Q9H3N1 280 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 ERVK-5Q9HDB9 667 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 MAD2L2Q9UI95 211 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 NEDD4P46934 1319 aa9.95□□□□□ -0.82
SMG1-216ENST00000569122 EP300Q09472 2414 aaPredicted RBP9.95□□□□□ -0.82
SMG1-216ENST00000569122 EPG5Q9HCE0 2579 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 KIAA1217Q5T5P2 1943 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 A0A0D9SFI3 127 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 SPDYE4A6NLX3 237 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 PRR5-ARHGAP8B1AHC4 643 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 B4E1Z4 1266 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 PIK3CDO00329 1044 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 CLASP2O75122 1294 aaKnown RBP9.94□□□□□ -0.82
SMG1-216ENST00000569122 KCNA2P16389 499 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 ZSCAN20P17040 1043 aaPredicted RBP9.94□□□□□ -0.82
SMG1-216ENST00000569122 CA8P35219 290 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 ALDH7A1P49419 539 aaKnown RBP9.94□□□□□ -0.82
SMG1-216ENST00000569122 ARHGAP8P85298 464 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 TMEM62Q0P6H9 643 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 MTMR1Q13613 665 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 TMEM266Q2M3C6 531 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 ELMSAN1Q6PJG2 1045 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 PIGSQ96S52 555 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 ST3GAL5Q9UNP4 418 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 GINS2Q9Y248 185 aa9.94□□□□□ -0.82
SMG1-216ENST00000569122 ERICH2A1L162 156 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 KINO60870 393 aaKnown RBP9.93□□□□□ -0.82
SMG1-216ENST00000569122 STAT5BP51692 787 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 CRYBB1P53674 252 aaPredicted RBP9.93□□□□□ -0.82
SMG1-216ENST00000569122 POLGP54098 1239 aaPredicted RBP9.93□□□□□ -0.82
SMG1-216ENST00000569122 TRDNQ13061 729 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 RSPO4Q2I0M5 234 aaPredicted RBP9.93□□□□□ -0.82
SMG1-216ENST00000569122 MTHFD1LQ6UB35 978 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 CYP26C1Q6V0L0 522 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 ZNF589Q86UQ0 364 aaPredicted RBP9.93□□□□□ -0.82
SMG1-216ENST00000569122 STAMQ92783 540 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 TMEM169Q96HH4 297 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 SDF4Q9BRK5 362 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 MRPL9Q9BYD2 267 aaKnown RBP9.93□□□□□ -0.82
SMG1-216ENST00000569122 SMOC2Q9H3U7 446 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 SFXN1Q9H9B4 322 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 KCNK12Q9HB15 430 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 JPH1Q9HDC5 661 aaPredicted RBP9.93□□□□□ -0.82
SMG1-216ENST00000569122 DPP7Q9UHL4 492 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 NOC2LQ9Y3T9 749 aaKnown RBP9.93□□□□□ -0.82
SMG1-216ENST00000569122 IRAK3Q9Y616 596 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms