RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	EXOC8	Q8IYI6	725 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	MICALL1	Q8N3F8	863 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	TOP1MT	Q969P6	601 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	LENG9	Q96B70	501 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	SAMD11	Q96NU1	681 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	JPH2	Q9BR39	696 aa	Predicted RBP	11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	UNC45A	Q9H3U1	944 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	LRFN2	Q9ULH4	789 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	AKT3	Q9Y243	479 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	COL6A3	P12111	3177 aa		11.67	□□□□□ -0.54
UBR1-207	ENST00000568782	SI	P14410	1827 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	DENND3	A2RUS2	1198 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	RPS6KA5	O75582	802 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	PSMD10	O75832	226 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	CTDNEP1	O95476	244 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	MMP1	P03956	469 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	PRKCE	Q02156	737 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	MGAT3	Q09327	533 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	LPIN1	Q14693	890 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	RABEP1	Q15276	862 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	SKIV2L	Q15477	1246 aa	Known RBP	11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	CCDC85B	Q15834	202 aa	Predicted RBP	11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	C8orf34	Q49A92	452 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	XKR3	Q5GH77	459 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	EFCAB12	Q6NXP0	572 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	CCDC83	Q8IWF9	413 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	NSUN7	Q8NE18	718 aa	Known RBP	11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	C8orf76	Q96K31	380 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	SUGCT	Q9HAC7	445 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	RWDD3	Q9Y3V2	267 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	NLRC5	Q86WI3	1866 aa		11.66	□□□□□ -0.54
UBR1-207	ENST00000568782	IGSF9B	Q9UPX0	1349 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	KDM3A	Q9Y4C1	1321 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	DDX11L8	A8MPP1	907 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	LARGE1	O95461	756 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	CD52	P31358	61 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	FOSB	P53539	338 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	CRYBB1	P53674	252 aa	Predicted RBP	11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	PSMC5	P62195	406 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	NPY5R	Q15761	445 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	OTUD6A	Q7L8S5	288 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	DIS3L2	Q8IYB7	885 aa	Known RBP	11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	FIBCD1	Q8N539	461 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	SYMPK	Q92797	1274 aa	Known RBP	11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	ZBTB10	Q96DT7	871 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	CCDC43	Q96MW1	224 aa	Known RBP	11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	MBOAT7	Q96N66	472 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	GJB4	Q9NTQ9	266 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	MTUS1	Q9ULD2	1270 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	PADI3	Q9ULW8	664 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	PCDHA12	Q9UN75	941 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	TTC3	P53804	2025 aa		11.65	□□□□□ -0.54
UBR1-207	ENST00000568782	RALGAPA2	Q2PPJ7	1873 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	LINC01553	A4QN01	128 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	ENPP3	O14638	875 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	JAK2	O60674	1132 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	C22orf31	O95567	290 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	P4HB	P07237	508 aa	Known RBP	11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	FDPS	P14324	419 aa	Known RBP	11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	ZSCAN20	P17040	1043 aa	Predicted RBP	11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	ATP4A	P20648	1035 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	QARS	P47897	775 aa	Known RBP	11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	RBM25	P49756	843 aa	Known RBP	11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	ERVK-21	P61565	698 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	HTRA4	P83105	476 aa	Predicted RBP	11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	NR5A1	Q13285	461 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	PPP2R5C	Q13362	524 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	CALCRL	Q16602	461 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	PTPRO	Q16827	1216 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	AAK1	Q2M2I8	961 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	MTERF2	Q49AM1	385 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	KRT40	Q6A162	431 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	NCAPH2	Q6IBW4	605 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	KIAA0319L	Q8IZA0	1049 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	FBXO22	Q8NEZ5	403 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	ETNPPL	Q8TBG4	499 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	OXER1	Q8TDS5	423 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	INO80B	Q9C086	356 aa	Predicted RBP	11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	LMCD1	Q9NZU5	365 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	PCDHB7	Q9Y5E2	793 aa		11.64	□□□□□ -0.55
UBR1-207	ENST00000568782	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	LCHN	A4D1U4	455 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	BTBD18	B2RXH4	712 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	DLL1	O00548	723 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	SLC37A4	O43826	429 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	NEMF	O60524	1076 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	VTN	P04004	478 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	IBSP	P21815	317 aa	Predicted RBP	11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	MCM2	P49736	904 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	NLRP11	P59045	1033 aa	Known RBP	11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	BTG3	Q14201	252 aa	Predicted RBP	11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	KIZ	Q2M2Z5	673 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	TCTN1	Q2MV58	587 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	BANK1	Q8NDB2	785 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	NLRP7	Q8WX94	980 aa		11.63	□□□□□ -0.55
UBR1-207	ENST00000568782	SLC7A3	Q8WY07	619 aa		11.63	□□□□□ -0.55

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