RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 RCOR1Q9UKL0 485 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 PPP1R9AQ9ULJ8 1098 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 STX8Q9UNK0 236 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 PCDHB5Q9Y5E4 795 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 SNED1Q8TER0 1413 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 NID2Q14112 1375 aa7.06□□□□□ -1.28
CAPN3-218ENST00000568153 SYNGAP1Q96PV0 1343 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 LTBP3Q9NS15 1303 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 DUOX1Q9NRD9 1551 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 TCP10L2B9ZVM9 353 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 FZD9O00144 591 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 MPHOSPH10O00566 681 aaKnown RBP7.05□□□□□ -1.28
CAPN3-218ENST00000568153 DHX15O43143 795 aaKnown RBP7.05□□□□□ -1.28
CAPN3-218ENST00000568153 SART1O43290 800 aaKnown RBP7.05□□□□□ -1.28
CAPN3-218ENST00000568153 FIBPO43427 364 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 LETM1O95202 739 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-218ENST00000568153 TTLL1O95922 423 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 PARP1P09874 1014 aaKnown RBP7.05□□□□□ -1.28
CAPN3-218ENST00000568153 TFE3P19532 575 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-218ENST00000568153 U2AF2P26368 475 aaKnown RBP eCLIP7.05□□□□□ -1.28
CAPN3-218ENST00000568153 SMARCA1P28370 1054 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 GUCY1A2P33402 732 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 SHMT1P34896 483 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 CACNB3P54284 484 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 FANCCQ00597 558 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 GRM4Q14833 912 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 FKBP1CQ5VVH2 108 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 TATDN1Q6P1N9 297 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-218ENST00000568153 TMTC3Q6ZXV5 915 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 Q8N3U1 123 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 SRBD1Q8N5C6 995 aaKnown RBP7.05□□□□□ -1.28
CAPN3-218ENST00000568153 C2CD4AQ8NCU7 369 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-218ENST00000568153 PHC3Q8NDX5 983 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 GPT2Q8TD30 523 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 UTP4Q969X6 686 aaKnown RBP7.05□□□□□ -1.28
CAPN3-218ENST00000568153 SYAP1Q96A49 352 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-218ENST00000568153 CEP95Q96GE4 821 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 AIFM3Q96NN9 605 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 RSRP1Q9BUV0 290 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 KANSL2Q9H9L4 492 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 CABP5Q9NP86 173 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 RTEL1Q9NZ71 1219 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 RAXQ9Y2V3 346 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 SLX4Q8IY92 1834 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 DOCK2Q92608 1830 aa7.05□□□□□ -1.28
CAPN3-218ENST00000568153 QSER1Q2KHR3 1735 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 ELP1O95163 1332 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 IGKV6D-41A0A0C4DH26 115 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 CLRN2A0PK11 232 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 KLRF2D3W0D1 207 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 H7C1D1 291 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 TMPRSS2O15393 492 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 PLEKHA8P1O95397 391 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 MMP1P03956 469 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 AKR1B1P15121 316 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 FSTP19883 344 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 ZNF76P36508 570 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 ZNF280AP59817 542 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-218ENST00000568153 KIF23Q02241 960 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-218ENST00000568153 CEBPZQ03701 1054 aaKnown RBP7.04□□□□□ -1.28
CAPN3-218ENST00000568153 SEPT6Q14141 434 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 SF3A1Q15459 793 aaKnown RBP7.04□□□□□ -1.28
CAPN3-218ENST00000568153 PKN1Q16512 942 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 SCARA3Q6AZY7 606 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 CAVIN1Q6NZI2 390 aaKnown RBP7.04□□□□□ -1.28
CAPN3-218ENST00000568153 HS2ST1Q7LGA3 356 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 NLGN2Q8NFZ4 835 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 MKL1Q969V6 931 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 ZBED3Q96IU2 234 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-218ENST00000568153 FOXP1Q9H334 677 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-218ENST00000568153 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.04□□□□□ -1.28
CAPN3-218ENST00000568153 BRMS1Q9HCU9 246 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 MYOZ2Q9NPC6 264 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 GJB4Q9NTQ9 266 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 KBTBD4Q9NVX7 518 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 MAD2L2Q9UI95 211 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 HERC5Q9UII4 1024 aaKnown RBP7.04□□□□□ -1.28
CAPN3-218ENST00000568153 CNOT7Q9UIV1 285 aaKnown RBP7.04□□□□□ -1.28
CAPN3-218ENST00000568153 GGT7Q9UJ14 662 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 AP4E1Q9UPM8 1137 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 ACTL7BQ9Y614 415 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 LRRC37AA6NMS7 1700 aa7.04□□□□□ -1.28
CAPN3-218ENST00000568153 A0A1B0GUL6 1792 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 MYO5AQ9Y4I1 1855 aaKnown RBP7.03□□□□□ -1.28
CAPN3-218ENST00000568153 BTBD18B2RXH4 712 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 SCAMP3O14828 347 aaKnown RBP7.03□□□□□ -1.28
CAPN3-218ENST00000568153 SLFN14P0C7P3 912 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 SCG2P13521 617 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 GBP2P32456 591 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-218ENST00000568153 DEKP35659 375 aaKnown RBP7.03□□□□□ -1.28
CAPN3-218ENST00000568153 TNNI2P48788 182 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 GMPSP49915 693 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-218ENST00000568153 NLRP5P59047 1200 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 PFKFB3Q16875 520 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-218ENST00000568153 ABCB5Q2M3G0 1257 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-218ENST00000568153 TMEM179Q6ZVK1 233 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 FAM83AQ86UY5 434 aa7.03□□□□□ -1.28
CAPN3-218ENST00000568153 RELL1Q8IUW5 271 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms