RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 LRIG3Q6UXM1 1119 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 ARHGAP18Q8N392 663 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 MMGT1Q8N4V1 131 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 ZBTB10Q96DT7 871 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 ANKZF1Q9H8Y5 726 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 TRPC6Q9Y210 931 aa13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 CLTCQ00610 1675 aaKnown RBP13.33□□□□□ -0.28
CSPG4P13-202ENST00000567704 HSPA9P38646 679 aaKnown RBP13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 PLCB4Q15147 1175 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 USPL1Q5W0Q7 1092 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 TRIM51Q9BSJ1 452 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 NDE1Q9NXR1 346 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 CEP152O94986 1710 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 FAM187AA6NFU0 413 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 RAD51CO43502 376 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 GAP43P17677 238 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 SLC8A3P57103 927 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 KIF22Q14807 665 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 MFSD14BQ5SR56 506 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 FBXO11Q86XK2 927 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 PDIK1LQ8N165 341 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 SEC31BQ9NQW1 1179 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 SMYD2Q9NRG4 433 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 AFG3L2Q9Y4W6 797 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 SRGNP10124 158 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 POLR2BP30876 1174 aaKnown RBP13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 ARFIP2P53365 341 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 CCDC137Q6PK04 289 aaKnown RBP13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 RGS9BPQ6ZS82 235 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 SUPT20HQ8NEM7 779 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 TRIM56Q9BRZ2 755 aaKnown RBP13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 PCDHB4Q9Y5E5 795 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 GNPATO15228 680 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 CHRNA3P32297 505 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 PPP4R3CPQ6ZMV5 832 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 PROM2Q8N271 834 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 GABPB2Q8TAK5 448 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 MDM1Q8TC05 714 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 TRIM11Q96F44 468 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 DYNLL2Q96FJ2 89 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 KIF9Q9HAQ2 790 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 DONSONQ9NYP3 566 aa13.32□□□□□ -0.28
CSPG4P13-202ENST00000567704 MAP3K15Q6ZN16 1313 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 USP17L3A6NCW0 530 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 USP17L4A6NCW7 530 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 H7C1W4 665 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 MXI1P50539 228 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 DPYDQ12882 1025 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 UBE2SQ16763 222 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 USP17L1Q7RTZ2 530 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 CNBD1Q8NA66 436 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 DBR1Q9UK59 544 aaKnown RBP13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 TTC7AQ9ULT0 858 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 ZC3H13Q5T200 1668 aaKnown RBP13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 GOLGA8SH3BPF8 625 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 USP17L8P0C7I0 530 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 SLC16A2P36021 539 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 ATG16L1Q676U5 607 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 CRLF3Q8IUI8 442 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 GRAMD1AQ96CP6 724 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 PRR36Q9H6K5 1346 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 USP42Q9H9J4 1324 aaKnown RBP13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 REREQ9P2R6 1566 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 IQANK1A0A1B0GTG1 560 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 PVALEFA0A1B0GWK0 134 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 SFI1A8K8P3 1242 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 IGF2BP3O00425 579 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 DNAJC6O75061 913 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 CPP00450 1065 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 AGTP01019 485 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 EEF1B2P24534 225 aaKnown RBP13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 ATP2C1P98194 919 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 TTLL12Q14166 644 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 TRIM65Q6PJ69 517 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 DEPTORQ8TB45 409 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 HPS3Q969F9 1004 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 STAMBPL1Q96FJ0 436 aa13.31□□□□□ -0.28
CSPG4P13-202ENST00000567704 TTC4O95801 387 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 GARSP41250 739 aaKnown RBP13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 BTDP43251 543 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 AP2B1P63010 937 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 ERVK-24P63145 666 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 SLC20A2Q08357 652 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 NR1H3Q13133 447 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 PFKFB3Q16875 520 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 JADE1Q6IE81 842 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 ADSSL1Q8N142 457 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 HOOK2Q96ED9 719 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 OLFM3Q96PB7 478 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 EFHD1Q9BUP0 239 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 USP40Q9NVE5 1235 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 SEPT10Q9P0V9 454 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 DLGAP2Q9P1A6 1054 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 POLR1AO95602 1720 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 GSTA1P08263 222 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 GSTA2P09210 222 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 MDM2Q00987 491 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms