RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 GABBR1Q9UBS5 961 aa18.73■□□□□ 0.59
CLN6-208ENST00000567060 LRWD1Q9UFC0 647 aa18.73■□□□□ 0.59
CLN6-208ENST00000567060 SRPRBQ9Y5M8 271 aaKnown RBP18.73■□□□□ 0.59
CLN6-208ENST00000567060 NRCAMQ92823 1304 aa18.73■□□□□ 0.59
CLN6-208ENST00000567060 RRN3P2A6NIE6 340 aa18.72■□□□□ 0.59
CLN6-208ENST00000567060 EML1O00423 815 aa18.72■□□□□ 0.59
CLN6-208ENST00000567060 RPLP2P05387 115 aaKnown RBP18.72■□□□□ 0.59
CLN6-208ENST00000567060 XRCC6P12956 609 aaKnown RBP eCLIP18.72■□□□□ 0.59
CLN6-208ENST00000567060 RPA1P27694 616 aa18.72■□□□□ 0.59
CLN6-208ENST00000567060 HOXC8P31273 242 aa18.72■□□□□ 0.59
CLN6-208ENST00000567060 MRPS5P82675 430 aaKnown RBP18.72■□□□□ 0.59
CLN6-208ENST00000567060 NBPF20Q3BBV1 942 aa18.72■□□□□ 0.59
CLN6-208ENST00000567060 XKR3Q5GH77 459 aa18.72■□□□□ 0.59
CLN6-208ENST00000567060 FOXD4L5Q5VV16 416 aaPredicted RBP18.72■□□□□ 0.59
CLN6-208ENST00000567060 PSRC1Q6PGN9 363 aaPredicted RBP18.72■□□□□ 0.59
CLN6-208ENST00000567060 C7orf31Q8N865 590 aa18.72■□□□□ 0.59
CLN6-208ENST00000567060 ADAMTS19Q8TE59 1207 aa18.72■□□□□ 0.59
CLN6-208ENST00000567060 FOXD4L4Q8WXT5 416 aaPredicted RBP18.72■□□□□ 0.59
CLN6-208ENST00000567060 HERVK_113Q902F9 699 aa18.72■□□□□ 0.59
CLN6-208ENST00000567060 UIMC1Q96RL1 719 aa18.72■□□□□ 0.59
CLN6-208ENST00000567060 EIF2AK1Q9BQI3 630 aaKnown RBP18.72■□□□□ 0.59
CLN6-208ENST00000567060 IL23AQ9NPF7 189 aa18.72■□□□□ 0.59
CLN6-208ENST00000567060 NRBP2Q9NSY0 501 aa18.72■□□□□ 0.59
CLN6-208ENST00000567060 KAT6AQ92794 2004 aa18.72■□□□□ 0.59
CLN6-208ENST00000567060 POTEB3A0JP26 581 aa18.71■□□□□ 0.59
CLN6-208ENST00000567060 POTEMA6NI47 508 aa18.71■□□□□ 0.59
CLN6-208ENST00000567060 SPTLC2O15270 562 aa18.71■□□□□ 0.59
CLN6-208ENST00000567060 TLR3O15455 904 aaKnown RBP18.71■□□□□ 0.59
CLN6-208ENST00000567060 DNM1Q05193 864 aaKnown RBP18.71■□□□□ 0.59
CLN6-208ENST00000567060 KRT79Q5XKE5 535 aa18.71■□□□□ 0.59
CLN6-208ENST00000567060 POTEBQ6S5H4 581 aa18.71■□□□□ 0.59
CLN6-208ENST00000567060 TRIM50Q86XT4 487 aa18.71■□□□□ 0.59
CLN6-208ENST00000567060 EXOC8Q8IYI6 725 aa18.71■□□□□ 0.59
CLN6-208ENST00000567060 KRI1Q8N9T8 703 aaKnown RBP18.71■□□□□ 0.59
CLN6-208ENST00000567060 ZNF579Q8NAF0 562 aaKnown RBP18.71■□□□□ 0.59
CLN6-208ENST00000567060 NKX2-4Q9H2Z4 354 aa18.71■□□□□ 0.59
CLN6-208ENST00000567060 GTF2IRD1Q9UHL9 959 aa18.71■□□□□ 0.59
CLN6-208ENST00000567060 RCOR1Q9UKL0 485 aa18.71■□□□□ 0.59
CLN6-208ENST00000567060 YBX2Q9Y2T7 364 aaKnown RBP18.71■□□□□ 0.59
CLN6-208ENST00000567060 TELO2Q9Y4R8 837 aa18.71■□□□□ 0.59
CLN6-208ENST00000567060 KDM3AQ9Y4C1 1321 aa18.71■□□□□ 0.59
CLN6-208ENST00000567060 TRANK1O15050 2925 aa18.7■□□□□ 0.58
CLN6-208ENST00000567060 VWA3AA6NCI4 1184 aa18.7■□□□□ 0.58
CLN6-208ENST00000567060 OATP04181 439 aa18.7■□□□□ 0.58
CLN6-208ENST00000567060 IGFBP4P22692 258 aa18.7■□□□□ 0.58
CLN6-208ENST00000567060 PLCB4Q15147 1175 aa18.7■□□□□ 0.58
CLN6-208ENST00000567060 ZNF484Q5JVG2 852 aa18.7■□□□□ 0.58
CLN6-208ENST00000567060 OTUD6AQ7L8S5 288 aa18.7■□□□□ 0.58
CLN6-208ENST00000567060 CKAP2LQ8IYA6 745 aa18.7■□□□□ 0.58
CLN6-208ENST00000567060 VWCEQ96DN2 955 aa18.7■□□□□ 0.58
CLN6-208ENST00000567060 UHRF1Q96T88 793 aaPredicted RBP18.7■□□□□ 0.58
CLN6-208ENST00000567060 LXNQ9BS40 222 aa18.7■□□□□ 0.58
CLN6-208ENST00000567060 NT5C3AQ9H0P0 336 aa18.7■□□□□ 0.58
CLN6-208ENST00000567060 FBXO2Q9UK22 296 aaPredicted RBP18.7■□□□□ 0.58
CLN6-208ENST00000567060 GRIN2DO15399 1336 aa18.7■□□□□ 0.58
CLN6-208ENST00000567060 UMODL1Q5DID0 1318 aa18.7■□□□□ 0.58
CLN6-208ENST00000567060 C17orf102A2RUQ5 167 aa18.69■□□□□ 0.58
CLN6-208ENST00000567060 SLITRK3O94933 977 aa18.69■□□□□ 0.58
CLN6-208ENST00000567060 FGBP02675 491 aa18.69■□□□□ 0.58
CLN6-208ENST00000567060 SMIM10L2AP0DMW4 78 aa18.69■□□□□ 0.58
CLN6-208ENST00000567060 SMIM10L2BP0DMW5 78 aa18.69■□□□□ 0.58
CLN6-208ENST00000567060 PSMC6P62333 389 aa18.69■□□□□ 0.58
CLN6-208ENST00000567060 PRKCEQ02156 737 aa18.69■□□□□ 0.58
CLN6-208ENST00000567060 CEBPZQ03701 1054 aaKnown RBP18.69■□□□□ 0.58
CLN6-208ENST00000567060 RAB30Q15771 203 aa18.69■□□□□ 0.58
CLN6-208ENST00000567060 IL17AQ16552 155 aa18.69■□□□□ 0.58
CLN6-208ENST00000567060 HYIQ5T013 277 aa18.69■□□□□ 0.58
CLN6-208ENST00000567060 NIFKQ9BYG3 293 aaKnown RBP18.69■□□□□ 0.58
CLN6-208ENST00000567060 FTOQ9C0B1 505 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLN6-208ENST00000567060 RNPEPQ9H4A4 650 aa18.69■□□□□ 0.58
CLN6-208ENST00000567060 TFIP11Q9UBB9 837 aaKnown RBP18.69■□□□□ 0.58
CLN6-208ENST00000567060 MSRAQ9UJ68 235 aa18.69■□□□□ 0.58
CLN6-208ENST00000567060 TRPC6Q9Y210 931 aa18.69■□□□□ 0.58
CLN6-208ENST00000567060 LOXHD1Q8IVV2 1947 aa18.68■□□□□ 0.58
CLN6-208ENST00000567060 CUTAO60888 179 aa18.68■□□□□ 0.58
CLN6-208ENST00000567060 TXLNAP40222 546 aa18.68■□□□□ 0.58
CLN6-208ENST00000567060 PPFIA1Q13136 1202 aa18.68■□□□□ 0.58
CLN6-208ENST00000567060 CSPP1Q1MSJ5 1256 aa18.68■□□□□ 0.58
CLN6-208ENST00000567060 OTOP2Q7RTS6 562 aa18.68■□□□□ 0.58
CLN6-208ENST00000567060 SNX29Q8TEQ0 813 aa18.68■□□□□ 0.58
CLN6-208ENST00000567060 DYDC2Q96IM9 177 aa18.68■□□□□ 0.58
CLN6-208ENST00000567060 NACC1Q96RE7 527 aa18.68■□□□□ 0.58
CLN6-208ENST00000567060 JPH2Q9BR39 696 aaPredicted RBP18.68■□□□□ 0.58
CLN6-208ENST00000567060 CCSER1Q9C0I3 900 aa18.68■□□□□ 0.58
CLN6-208ENST00000567060 ANKEF1Q9NU02 776 aa18.68■□□□□ 0.58
CLN6-208ENST00000567060 HDAC6Q9UBN7 1215 aa18.68■□□□□ 0.58
CLN6-208ENST00000567060 MAGEB2O15479 319 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 ZNF862O60290 1169 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 SPATA31C1P0DKV0 1188 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 BMP1P13497 986 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 ATP4AP20648 1035 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 MARK3P27448 753 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 MARCKSP29966 332 aaPredicted RBP18.67■□□□□ 0.58
CLN6-208ENST00000567060 CCT6AP40227 531 aaKnown RBP18.67■□□□□ 0.58
CLN6-208ENST00000567060 UBA7P41226 1012 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 ADAM17P78536 824 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 FAM47CQ5HY64 1035 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 TAF2Q6P1X5 1199 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 CATSPER3Q86XQ3 398 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 TPH2Q8IWU9 490 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms