RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 A6NJR5 290 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 KIAA0391O15091 583 aaKnown RBP4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 MEFVO15553 781 aaPredicted RBP4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 KRT38O76015 456 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 SCP2P22307 547 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 SERPINB6P35237 376 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 MXI1P50539 228 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 APLP1P51693 650 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 PDE1BQ01064 536 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 TFDP2Q14188 446 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 IQCB1Q15051 598 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 DHX40Q8IX18 779 aaKnown RBP4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 SP8Q8IXZ3 490 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 BBS5Q8N3I7 341 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 TBCKQ8TEA7 893 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 N4BP2L2Q92802 583 aaPredicted RBP4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 CHMP6Q96FZ7 201 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 ZNF512BQ96KM6 892 aaPredicted RBP4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 ANKRD27Q96NW4 1050 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 TSC22D3Q99576 134 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 PITPNM3Q9BZ71 974 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 CCSER1Q9C0I3 900 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 WNT8AQ9H1J5 351 aa4.68□□□□□ -1.66
LPCAT2-208ENST00000566915 ABCB11O95342 1321 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 PNPLA7Q6ZV29 1317 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 A0A1W2PQJ5 194 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 AGTP01019 485 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 MMEP08473 750 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 PLA2G4BP0C869 781 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 ATP1A3P13637 1013 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 PLCG1P19174 1290 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 TMOD1P28289 359 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 BTDP43251 543 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 YWHAGP61981 247 aaKnown RBP eCLIP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 NAALADL2Q58DX5 795 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 TEX9Q8N6V9 391 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 LINC00116Q8NCU8 138 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 OSBPL9Q96SU4 736 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 KIF2CQ99661 725 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 TIPINQ9BVW5 301 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 GCOM2Q9BZD3 368 aaPredicted RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 UPF3AQ9H1J1 476 aaKnown RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 L2HGDHQ9H9P8 463 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 CACYBPQ9HB71 228 aaKnown RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 STRIP2Q9ULQ0 834 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 PCDHB6Q9Y5E3 794 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 LRP6O75581 1613 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 PPP1R12AO14974 1030 aaPredicted RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 C21orf2O43822 256 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 PFDN1O60925 122 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 CHGBP05060 677 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 MYCLP12524 364 aaPredicted RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 ARL4CP56559 192 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 TAP1Q03518 808 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 SREBF2Q12772 1141 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 PDIA5Q14554 519 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 FAM102BQ5T8I3 360 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 TBC1D9BQ66K14 1250 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 RCSD1Q6JBY9 416 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 ZNF449Q6P9G9 518 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 NLRP14Q86W24 1093 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 TEX2Q8IWB9 1127 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 SYT2Q8N9I0 419 aaPredicted RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 ALKBH8Q96BT7 664 aaKnown RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 SYT17Q9BSW7 474 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 SRP68Q9UHB9 627 aaKnown RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 NDUFB9Q9Y6M9 179 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 F8W8V4 182 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 M0QZ92 97 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 PPP1R37O75864 691 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 CPP00450 1065 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 CA4P22748 312 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 BCAMP50895 628 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 AP3M2P53677 418 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 YARSP54577 528 aaKnown RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 GPC5P78333 572 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 ATP2C1P98194 919 aaPredicted RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 MDM2Q00987 491 aaPredicted RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 STAT4Q14765 748 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 NFIXQ14938 502 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 TAF12Q16514 161 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 MMEL1Q495T6 779 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 NUGGCQ68CJ6 796 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 CRLF3Q8IUI8 442 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 FOXP4Q8IVH2 680 aaPredicted RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 ANKRD13CQ8N6S4 541 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 FAM133AQ8N9E0 248 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 SDR42E1Q8WUS8 393 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 DCAF4Q8WV16 495 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 PRPF31Q8WWY3 499 aaKnown RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 POMGNT1Q8WZA1 660 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 SYN2Q92777 582 aaPredicted RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 GJA10Q969M2 543 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 MAP3K14Q99558 947 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 ROPN1BQ9BZX4 212 aaPredicted RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 GREM2Q9H772 168 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 ROPN1Q9HAT0 212 aaPredicted RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 TLR7Q9NYK1 1049 aaKnown RBP4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 NFU1Q9UMS0 254 aa4.67□□□□□ -1.66
LPCAT2-208ENST00000566915 ORC6Q9Y5N6 252 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms