RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 TLR5O60602 858 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 MBD4O95243 580 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 DLGAP3O95886 979 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 CST3P01034 146 aaPredicted RBP3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 SCG5P05408 212 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 PYGLP06737 847 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 ADH5P11766 374 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 LCP1P13796 627 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 C5AR1P21730 350 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 NTF4P34130 210 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 DDIT3P35638 169 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 IL6STP40189 918 aaPredicted RBP3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 TM4SF4P48230 202 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 PRIM2P49643 509 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 MECP2P51608 486 aaKnown RBP3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 MAPK10P53779 464 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 PRKCQQ04759 706 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 BTKQ06187 659 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 CYP4F3Q08477 520 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 BNIP3Q12983 259 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 TBX2Q13207 712 aaPredicted RBP3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 SEMA5AQ13591 1074 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 PDE1CQ14123 709 aaPredicted RBP3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 SLBPQ14493 270 aaKnown RBP eCLIP3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 TERF2Q15554 542 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 ZNF174Q15697 407 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 KCNMB1Q16558 191 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 CLEC16AQ2KHT3 1053 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 TOR2AQ5JU69 321 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 CREB3L3Q68CJ9 461 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 GGT6Q6P531 493 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 OVCH1Q7RTY7 1134 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 ZSWIM9Q86XI8 627 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 DENND1CQ8IV53 801 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 OR2C3Q8N628 320 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 KREMEN2Q8NCW0 462 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 RNF214Q8ND24 703 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 SYTL5Q8TDW5 730 aaPredicted RBP3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 GCC1Q96CN9 775 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 MIPEPQ99797 713 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 PRDM14Q9GZV8 571 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 PCIF1Q9H4Z3 704 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 IPPKQ9H8X2 491 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 PIDD1Q9HB75 910 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 CLIC5Q9NZA1 410 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 CLEC1BQ9P126 229 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 TMEFF2Q9UIK5 374 aaPredicted RBP3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 EDARQ9UNE0 448 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 DIS3Q9Y2L1 958 aaKnown RBP3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 SNX13Q9Y5W8 968 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 ACTL7BQ9Y614 415 aa3.98□□□□□ -1.77
HERPUD1-211ENST00000566550 SETD1BQ9UPS6 1966 aaKnown RBP3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 RRN3P2A6NIE6 340 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 RHPN2P1A8MT19 583 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 RBAK-RBAKDNI3L0D1 243 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 NFIBO00712 420 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 NCK2O43639 380 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 UBXN7O94888 489 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 TBC1D8O95759 1140 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 CD8BP10966 210 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 TNFSF4P23510 183 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 LSP1P33241 339 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 PPM1AP35813 382 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 BUD31P41223 144 aaPredicted RBP3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 ASPAP45381 313 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 NUCB1Q02818 461 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 G3BP1Q13283 466 aaKnown RBP eCLIP3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 MYBPC2Q14324 1141 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 PDCD1Q15116 288 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 CCDC38Q502W7 563 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 ATAT1Q5SQI0 421 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 RNF220Q5VTB9 566 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 ANGEL2Q5VTE6 544 aaKnown RBP3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 LBX2Q6XYB7 198 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 ARMCX6Q7L4S7 300 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 GPR155Q7Z3F1 870 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 CDH24Q86UP0 819 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 RASSF3Q86WH2 238 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 LIX1LQ8IVB5 337 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 FAM43AQ8N2R8 423 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 KIAA1958Q8N8K9 716 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 FRS2Q8WU20 508 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 PPP1R13LQ8WUF5 828 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 LMBR1Q8WVP7 490 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 FBXW5Q969U6 566 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 MVB12AQ96EY5 273 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 CHAMP1Q96JM3 812 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 FANCD2OSQ96PS1 177 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 KCNJ15Q99712 375 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 ZFYVE21Q9BQ24 234 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 MCMBPQ9BTE3 642 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 FOXQ1Q9C009 403 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 SEMA6CQ9H3T2 930 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 SP110Q9HB58 689 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 PDLIM7Q9NR12 457 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 VPS45Q9NRW7 570 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 MBNL3Q9NUK0 354 aaKnown RBP3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 PPARGC1AQ9UBK2 798 aaKnown RBP3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 SERPINB13Q9UIV8 391 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 CBLCQ9ULV8 474 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms