RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 RIF1Q5UIP0 2472 aaKnown RBP15.29■□□□□ 0.04
COMMD4-214ENST00000566230 NFASCO94856 1347 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 MYH9P35579 1960 aaKnown RBP15.28■□□□□ 0.04
COMMD4-214ENST00000566230 SH2B2O14492 632 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-214ENST00000566230 PRC1O43663 620 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 FGF18O76093 207 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 ATG7O95352 703 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 ATF7P17544 494 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-214ENST00000566230 KLRC1P26715 233 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 VCPP55072 806 aaKnown RBP15.28■□□□□ 0.04
COMMD4-214ENST00000566230 SIGLEC14Q08ET2 396 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 NFX1Q12986 1120 aaKnown RBP15.28■□□□□ 0.04
COMMD4-214ENST00000566230 ITGB3BPQ13352 177 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-214ENST00000566230 KCNC3Q14003 757 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 NECTIN1Q15223 517 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 RAB11FIP4Q86YS3 637 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 CCDC82Q8N4S0 544 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 TMEM40Q8WWA1 233 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 PRRX2Q99811 253 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 ADAM2Q99965 735 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 MTA3Q9BTC8 594 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 S1PR5Q9H228 398 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 ANO2Q9NQ90 1003 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 TLR9Q9NR96 1032 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 PCDHB7Q9Y5E2 793 aa15.28■□□□□ 0.04
COMMD4-214ENST00000566230 RBM8AQ9Y5S9 174 aaKnown RBP15.28■□□□□ 0.04
COMMD4-214ENST00000566230 IGKV6D-21A0A0A0MT36 114 aa15.27■□□□□ 0.04
COMMD4-214ENST00000566230 TBKBP1A7MCY6 615 aa15.27■□□□□ 0.04
COMMD4-214ENST00000566230 C9IYK1 514 aa15.27■□□□□ 0.04
COMMD4-214ENST00000566230 FSCN2O14926 492 aa15.27■□□□□ 0.04
COMMD4-214ENST00000566230 RNF20Q5VTR2 975 aa15.27■□□□□ 0.04
COMMD4-214ENST00000566230 NFXL1Q6ZNB6 911 aa15.27■□□□□ 0.04
COMMD4-214ENST00000566230 KIAA0319LQ8IZA0 1049 aa15.27■□□□□ 0.04
COMMD4-214ENST00000566230 COLGALT1Q8NBJ5 622 aa15.27■□□□□ 0.04
COMMD4-214ENST00000566230 TNPO1Q92973 898 aaKnown RBP15.27■□□□□ 0.04
COMMD4-214ENST00000566230 SNX27Q96L92 541 aa15.27■□□□□ 0.04
COMMD4-214ENST00000566230 RGS18Q9NS28 235 aa15.27■□□□□ 0.04
COMMD4-214ENST00000566230 TYW1Q9NV66 732 aaKnown RBP15.27■□□□□ 0.04
COMMD4-214ENST00000566230 WDR81Q562E7 1941 aa15.27■□□□□ 0.03
COMMD4-214ENST00000566230 PLXNA3P51805 1871 aa15.27■□□□□ 0.03
COMMD4-214ENST00000566230 CCDC69A6NI79 296 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 ST18O60284 1047 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 RPS6KA5O75582 802 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 CCNE2O96020 404 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 SPOUT1Q5T280 376 aaKnown RBP15.26■□□□□ 0.03
COMMD4-214ENST00000566230 TYW1BQ6NUM6 668 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 SYCE2Q6PIF2 218 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 TMEM184AQ6ZMB5 413 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 TMTC2Q8N394 836 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 PGBD1Q96JS3 809 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 TMEM87BQ96K49 555 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 CDCA3Q99618 268 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-214ENST00000566230 SDF4Q9BRK5 362 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 CWH43Q9H720 699 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 AGO4Q9HCK5 861 aaKnown RBP15.26■□□□□ 0.03
COMMD4-214ENST00000566230 AAASQ9NRG9 546 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 FAM86C1Q9NVL1 165 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 TMEM260Q9NX78 707 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 ST3GAL5Q9UNP4 418 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 GINS2Q9Y248 185 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 WDR87Q6ZQQ6 2873 aa15.26■□□□□ 0.03
COMMD4-214ENST00000566230 ZBTB42B2RXF5 422 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 MEIS1O00470 390 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 EPB41L2O43491 1005 aaKnown RBP15.25■□□□□ 0.03
COMMD4-214ENST00000566230 CALM1P0DP23 149 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 CALM2P0DP24 149 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 CALM3P0DP25 149 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 AVPR2P30518 371 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 MCM5P33992 734 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 LIFRP42702 1097 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 FAM189BP81408 668 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 APOBRQ0VD83 1088 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 PTPN21Q16825 1174 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 CEP55Q53EZ4 464 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 WWC2Q6AWC2 1192 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 PDE12Q6L8Q7 609 aaKnown RBP15.25■□□□□ 0.03
COMMD4-214ENST00000566230 ANKRD54Q6NXT1 300 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 ABHD15Q6UXT9 468 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 FAM43BQ6ZT52 329 aaPredicted RBP15.25■□□□□ 0.03
COMMD4-214ENST00000566230 TMTC3Q6ZXV5 915 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 SLC24A5Q71RS6 500 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 HEATR3Q7Z4Q2 680 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 THNSL1Q8IYQ7 743 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 FANCBQ8NB91 859 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 NEK1Q96PY6 1258 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 C1orf112Q9NSG2 853 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 FAM186AA6NE01 2351 aa15.25■□□□□ 0.03
COMMD4-214ENST00000566230 DENND3A2RUS2 1198 aa15.24■□□□□ 0.03
COMMD4-214ENST00000566230 HBP1O60381 514 aa15.24■□□□□ 0.03
COMMD4-214ENST00000566230 PDGFBP01127 241 aaPredicted RBP15.24■□□□□ 0.03
COMMD4-214ENST00000566230 FGFR1P11362 822 aa15.24■□□□□ 0.03
COMMD4-214ENST00000566230 ATP4AP20648 1035 aa15.24■□□□□ 0.03
COMMD4-214ENST00000566230 TECP42680 631 aa15.24■□□□□ 0.03
COMMD4-214ENST00000566230 SLC26A2P50443 739 aa15.24■□□□□ 0.03
COMMD4-214ENST00000566230 DSC3Q14574 896 aa15.24■□□□□ 0.03
COMMD4-214ENST00000566230 TSGA10IPQ3SY00 556 aa15.24■□□□□ 0.03
COMMD4-214ENST00000566230 CREB3L3Q68CJ9 461 aa15.24■□□□□ 0.03
COMMD4-214ENST00000566230 LRRC55Q6ZSA7 311 aa15.24■□□□□ 0.03
COMMD4-214ENST00000566230 APOL5Q9BWW9 433 aa15.24■□□□□ 0.03
COMMD4-214ENST00000566230 LRRC2Q9BYS8 371 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms