RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 ERC1Q8IUD2 1116 aa11.93□□□□□ -0.5
UBFD1-205ENST00000566136 SLC4A9Q96Q91 983 aa11.93□□□□□ -0.5
UBFD1-205ENST00000566136 METTL22Q9BUU2 404 aaPredicted RBP11.93□□□□□ -0.5
UBFD1-205ENST00000566136 MARK1Q9P0L2 795 aa11.93□□□□□ -0.5
UBFD1-205ENST00000566136 SNX14Q9Y5W7 946 aa11.93□□□□□ -0.5
UBFD1-205ENST00000566136 UBR3Q6ZT12 1888 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 PLEKHG2Q9H7P9 1386 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 A0A1W2PQU0 124 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 FAM221AA4D161 298 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 CPA1P15085 419 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 VEGFAP15692 232 aaPredicted RBP11.92□□□□□ -0.5
UBFD1-205ENST00000566136 HMGB2P26583 209 aaKnown RBP11.92□□□□□ -0.5
UBFD1-205ENST00000566136 CASQ1P31415 396 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 MCM2P49736 904 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 GTF2H3Q13889 308 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 HSP90AA2PQ14568 343 aaPredicted RBP11.92□□□□□ -0.5
UBFD1-205ENST00000566136 KIAA0753Q2KHM9 967 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 SPATA1Q5VX52 437 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 KIAA1211Q6ZU35 1233 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 IQCA1Q86XH1 822 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 OR2C3Q8N628 320 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 JAKMIP1Q96N16 626 aaKnown RBP11.92□□□□□ -0.5
UBFD1-205ENST00000566136 FMNL2Q96PY5 1086 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 ACAD9Q9H845 621 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 ABCB6Q9NP58 842 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 LMBRD1Q9NUN5 540 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 PCDHGB2Q9Y5G2 931 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 METTL12A8MUP2 240 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 BHMG1C9JSJ3 638 aaPredicted RBP11.92□□□□□ -0.5
UBFD1-205ENST00000566136 BACH1O14867 736 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 ATP6V1E1P36543 226 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 PTH1RQ03431 593 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 CUL4AQ13619 759 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 SURF1Q15526 300 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 MEA1Q16626 185 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 PARP10Q53GL7 1025 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 KIAA1211LQ6NV74 962 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 CYP2U1Q7Z449 544 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 FCHSD1Q86WN1 690 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 PTRH1Q86Y79 214 aaKnown RBP11.92□□□□□ -0.5
UBFD1-205ENST00000566136 EHMT1Q9H9B1 1298 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 ATP6V0A4Q9HBG4 840 aa11.92□□□□□ -0.5
UBFD1-205ENST00000566136 ARAFP10398 606 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 PCSK2P16519 638 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 PIK3CBP42338 1070 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 KLHL40Q2TBA0 621 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 STAG2Q8N3U4 1231 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 C1orf162Q8NEQ5 155 aaPredicted RBP11.91□□□□□ -0.5
UBFD1-205ENST00000566136 OR8H1Q8NGG4 311 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 SDF4Q9BRK5 362 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 MS4A5Q9H3V2 200 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 ZSWIM5Q9P217 1185 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 CORO2BQ9UQ03 480 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 LIFRP42702 1097 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 CAVIN1Q6NZI2 390 aaKnown RBP11.91□□□□□ -0.5
UBFD1-205ENST00000566136 CPLX2Q6PUV4 134 aaKnown RBP11.91□□□□□ -0.5
UBFD1-205ENST00000566136 UBE3BQ7Z3V4 1068 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 HDAC2Q92769 488 aaKnown RBP11.91□□□□□ -0.5
UBFD1-205ENST00000566136 PHACTR1Q9C0D0 580 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 BCL2L12Q9HB09 334 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 TCF7L1Q9HCS4 588 aa11.91□□□□□ -0.5
UBFD1-205ENST00000566136 DTNBO60941 627 aa11.9□□□□□ -0.5
UBFD1-205ENST00000566136 CYP11A1P05108 521 aa11.9□□□□□ -0.5
UBFD1-205ENST00000566136 OVCH2Q7RTZ1 564 aa11.9□□□□□ -0.5
UBFD1-205ENST00000566136 PPM1NQ8N819 430 aa11.9□□□□□ -0.5
UBFD1-205ENST00000566136 KCTD13Q8WZ19 329 aa11.9□□□□□ -0.5
UBFD1-205ENST00000566136 EHD4Q9H223 541 aa11.9□□□□□ -0.5
UBFD1-205ENST00000566136 BOLA2Q9H3K6 86 aa11.9□□□□□ -0.5
UBFD1-205ENST00000566136 SUV39H2Q9H5I1 410 aa11.9□□□□□ -0.5
UBFD1-205ENST00000566136 FBXL5Q9UKA1 691 aa11.9□□□□□ -0.5
UBFD1-205ENST00000566136 MRC1P22897 1456 aa11.9□□□□□ -0.5
UBFD1-205ENST00000566136 FSCN2O14926 492 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 PLCG2P16885 1265 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 ATF7P17544 494 aaPredicted RBP11.89□□□□□ -0.51
UBFD1-205ENST00000566136 RECQLP46063 649 aaPredicted RBP11.89□□□□□ -0.51
UBFD1-205ENST00000566136 CDK8P49336 464 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 GJC2Q5T442 439 aaPredicted RBP11.89□□□□□ -0.51
UBFD1-205ENST00000566136 PDZD4Q76G19 769 aaPredicted RBP11.89□□□□□ -0.51
UBFD1-205ENST00000566136 N4BP2L2Q92802 583 aaPredicted RBP11.89□□□□□ -0.51
UBFD1-205ENST00000566136 FAM227BQ96M60 508 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 PDRG1Q9NUG6 133 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 COMMD8Q9NX08 183 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 LHX6Q9UPM6 363 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 TRBV23-1A0A0A0MS06 115 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 DDX3XO00571 662 aaKnown RBP eCLIP11.89□□□□□ -0.51
UBFD1-205ENST00000566136 HNRNPCP07910 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
UBFD1-205ENST00000566136 ACPPP15309 386 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 TNNT3P45378 269 aaPredicted RBP11.89□□□□□ -0.51
UBFD1-205ENST00000566136 PPFIA1Q13136 1202 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 PIK3R6Q5UE93 754 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 LIX1LQ8IVB5 337 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 SCUBE3Q8IX30 993 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 ZNF784Q8NCA9 323 aaPredicted RBP11.89□□□□□ -0.51
UBFD1-205ENST00000566136 TRIM44Q96DX7 344 aaPredicted RBP11.89□□□□□ -0.51
UBFD1-205ENST00000566136 FAXDC2Q96IV6 333 aa11.89□□□□□ -0.51
UBFD1-205ENST00000566136 SORBS1Q9BX66 1292 aaKnown RBP11.89□□□□□ -0.51
UBFD1-205ENST00000566136 AFDNP55196 1824 aaKnown RBP11.89□□□□□ -0.51
UBFD1-205ENST00000566136 RASA4BC9J798 803 aa11.88□□□□□ -0.51
UBFD1-205ENST00000566136 CNOT4O95628 575 aaKnown RBP11.88□□□□□ -0.51
UBFD1-205ENST00000566136 C6orf222P0C671 652 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms