RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 SERINC3Q13530 473 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 EML3Q32P44 896 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 USH1GQ495M9 461 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 GLIPR1L2Q4G1C9 344 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 ZCWPW2Q504Y3 356 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 CATSPER3Q86XQ3 398 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 SYT2Q8N9I0 419 aaPredicted RBP8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 HAUS4Q9H6D7 363 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 ZNF277Q9NRM2 450 aaPredicted RBP8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 PCDHA2Q9Y5H9 948 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 POTEB3A0JP26 581 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 CLRN2A0PK11 232 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 POTECB2RU33 542 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 E9PMD0 336 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 FAM86B1E9PN63 330 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 GPR182O15218 404 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 MED24O75448 989 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 FAM86B2P0C5J1 330 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 MPSTP25325 297 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 SEC13P55735 322 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 KIF4BQ2VIQ3 1234 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 C4orf46Q504U0 113 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 WDR59Q6PJI9 974 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 POTEBQ6S5H4 581 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 LRRC55Q6ZSA7 311 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 C11orf96Q7Z7L8 435 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 HPS3Q969F9 1004 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 P2RX7Q99572 595 aaKnown RBP8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 CHP1Q99653 195 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 LZTFL1Q9NQ48 299 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 PIM2Q9P1W9 311 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 PGAP2Q9UHJ9 254 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 PLAGL2Q9UPG8 496 aa8.01□□□□□ -1.13
HERPUD1-209ENST00000564678 KIF13BQ9NQT8 1826 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 RASSF10A6NK89 507 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 EIF3CLB5ME19 914 aaKnown RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 GCOM1H8Y6P7 765 aaPredicted RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 SMAPO00193 183 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 MSH4O15457 936 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 TADA3O75528 432 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 IPO7O95373 1038 aaKnown RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 SLC10A3P09131 477 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 POLR2MP0CAP2 368 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 SPATA31C1P0DKV0 1188 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 IRX5P78411 483 aaPredicted RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 ELF2Q15723 593 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 ERCC6LQ2NKX8 1250 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 EDRF1Q3B7T1 1238 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 HERC4Q5GLZ8 1057 aaPredicted RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 ODR4Q5SWX8 454 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 GPBP1Q86WP2 473 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 ZC3H3Q8IXZ2 948 aaKnown RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 SPICE1Q8N0Z3 855 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 SAMD3Q8N6K7 520 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 ACER1Q8TDN7 264 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 EIF3CQ99613 913 aaKnown RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 NUCKS1Q9H1E3 243 aaKnown RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 SRA1Q9HD15 236 aaKnown RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 IGLV3-22A0A075B6J6 115 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 CTAGE9A4FU28 777 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 WNT10BO00744 389 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 KRT86O43790 486 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 SSBP05455 408 aaKnown RBP eCLIP8□□□□□ -1.13
HERPUD1-209ENST00000564678 KRT18P05783 430 aaKnown RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 H2AFXP16104 143 aaPredicted RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 RPS12P25398 132 aaKnown RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 SNAP25P60880 206 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 CXCL9Q07325 125 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 TNFAIP1Q13829 316 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 TNIP1Q15025 636 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 ARSHQ5FYA8 562 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 ZNF569Q5MCW4 686 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 FAM83BQ5T0W9 1011 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 CIAPIN1Q6FI81 312 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 GPR161Q8N6U8 529 aaKnown RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 CEP112Q8N8E3 955 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 EHBP1Q8NDI1 1231 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 ACRBPQ8NEB7 543 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 GJA10Q969M2 543 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 SLF1Q9BQI6 1058 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 CARD6Q9BX69 1037 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 MAF1Q9H063 256 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 VEZTQ9HBM0 779 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 TUFT1Q9NNX1 390 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 AGPAT5Q9NUQ2 364 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 ARGLU1Q9NWB6 273 aaPredicted RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 MAP3K20Q9NYL2 800 aaKnown RBP8□□□□□ -1.13
HERPUD1-209ENST00000564678 CDC23Q9UJX2 597 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 FAM184BQ9ULE4 1060 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 SIK3Q9Y2K2 1263 aa8□□□□□ -1.13
HERPUD1-209ENST00000564678 TRAF5O00463 557 aa7.99□□□□□ -1.13
HERPUD1-209ENST00000564678 EYA4O95677 639 aa7.99□□□□□ -1.13
HERPUD1-209ENST00000564678 CFBP00751 764 aa7.99□□□□□ -1.13
HERPUD1-209ENST00000564678 COL9A1P20849 921 aa7.99□□□□□ -1.13
HERPUD1-209ENST00000564678 ARHGAP25P42331 645 aa7.99□□□□□ -1.13
HERPUD1-209ENST00000564678 PPP2R3AQ06190 1150 aa7.99□□□□□ -1.13
HERPUD1-209ENST00000564678 PPP2R5CQ13362 524 aa7.99□□□□□ -1.13
HERPUD1-209ENST00000564678 GIT2Q14161 759 aa7.99□□□□□ -1.13
HERPUD1-209ENST00000564678 ENOX2Q16206 610 aaKnown RBP7.99□□□□□ -1.13
HERPUD1-209ENST00000564678 KIAA1755Q5JYT7 1200 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms