RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 DCBLD2Q96PD2 775 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 SENP7Q9BQF6 1050 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 DUSP12Q9UNI6 340 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 GPR179Q6PRD1 2367 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 SALL3Q9BXA9 1300 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 MTCL1Q9Y4B5 1905 aaKnown RBP8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 KRBA1A5PL33 1030 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 C2orf71A6NGG8 1288 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 TBKBP1A7MCY6 615 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 C9IYK1 514 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 ATP9AO75110 1047 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 CLASP2O75122 1294 aaKnown RBP8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 STAM2O75886 525 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 EOMESO95936 686 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 PDE4AP27815 886 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 TDGQ13569 410 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 ST3GAL2Q16842 350 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 GNPTABQ3T906 1256 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 SPOUT1Q5T280 376 aaKnown RBP8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 IER5Q5VY09 327 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 LRRC55Q6ZSA7 311 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 FCHSD1Q86WN1 690 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 SUMF1Q8NBK3 374 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 RUBCNQ92622 972 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 CELF4Q9BZC1 486 aaKnown RBP8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 NGRNQ9NPE2 291 aaKnown RBP8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 ENTPD7Q9NQZ7 604 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 CYP26B1Q9NR63 512 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 HELLSQ9NRZ9 838 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 RGS18Q9NS28 235 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 RNF19AQ9NV58 838 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 DLGAP2Q9P1A6 1054 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 LRFN2Q9ULH4 789 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 PCDHA1Q9Y5I3 950 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 COL4A3Q01955 1670 aa8.94□□□□□ -0.98
HERPUD1-206ENST00000563343 MYH9P35579 1960 aaKnown RBP8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 A0A0D9SFI3 127 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 GCOM1H8Y6P7 765 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 ZBTB5O15062 677 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 RPLP2P05387 115 aaKnown RBP8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 PARP1P09874 1014 aaKnown RBP8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 POLR2MP0CAP2 368 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 MS4A1P11836 297 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 KCNA2P16389 499 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 LAG3P18627 525 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 MARK3P27448 753 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 ATXN1P54253 815 aaKnown RBP8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 FAM189BP81408 668 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 SP4Q02446 784 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 TMEM62Q0P6H9 643 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 PAK2Q13177 524 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 TMEM266Q2M3C6 531 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 RARS2Q5T160 578 aaKnown RBP8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 MFSD6Q6ZSS7 791 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 ZNF589Q86UQ0 364 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 SIX5Q8N196 739 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 C12orf76Q8N812 135 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 ENAHQ8N8S7 591 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 MRPL43Q8N983 215 aaKnown RBP8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 RIN2Q8WYP3 895 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 FAM227BQ96M60 508 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 PCYT2Q99447 389 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 FAM49AQ9H0Q0 323 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 KAT14Q9H8E8 782 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 ERAP1Q9NZ08 941 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 RTEL1Q9NZ71 1219 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 PCDHB7Q9Y5E2 793 aa8.93□□□□□ -0.98
HERPUD1-206ENST00000563343 ATRXP46100 2492 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 CCER2I3L3R5 266 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 NARSO43776 548 aaKnown RBP8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 DHX16O60231 1041 aaKnown RBP8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 SP9P0CG40 484 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 FGFR1P11362 822 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 INSRRP14616 1297 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 PBX3P40426 434 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 IGBP1P78318 339 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 KCNT2Q6UVM3 1135 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 TMC7Q7Z402 723 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 SLC22A17Q8WUG5 538 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 TMEM40Q8WWA1 233 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 ESR2Q92731 530 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 CASD1Q96PB1 797 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 KCNK12Q9HB15 430 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 CDHR5Q9HBB8 845 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 MAD2L2Q9UI95 211 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 DBR1Q9UK59 544 aaKnown RBP8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 PCDHB8Q9UN66 801 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 NOC2LQ9Y3T9 749 aaKnown RBP8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 PCDHA2Q9Y5H9 948 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 DOCK6Q96HP0 2047 aa8.92□□□□□ -0.98
HERPUD1-206ENST00000563343 FAM208BQ5VWN6 2430 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 SMIM35A0A1B0GVV1 85 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 PALM3A6NDB9 673 aaPredicted RBP8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 RRN3P2A6NIE6 340 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 TRIM6-TRIM34B2RNG4 842 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 KLRF2D3W0D1 207 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 CYTH3O43739 400 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 ADRB1P08588 477 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 TIE1P35590 1138 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 NFX1Q12986 1120 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms