RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 FAM43BQ6ZT52 329 aaPredicted RBP19.02■□□□□ 0.64
CLK3-210ENST00000563112 FBXO22Q8NEZ5 403 aa19.02■□□□□ 0.64
CLK3-210ENST00000563112 AGO3Q9H9G7 860 aaKnown RBP19.02■□□□□ 0.64
CLK3-210ENST00000563112 SUGCTQ9HAC7 445 aa19.02■□□□□ 0.64
CLK3-210ENST00000563112 SIP14410 1827 aa19.02■□□□□ 0.63
CLK3-210ENST00000563112 IGSF9BQ9UPX0 1349 aa19.01■□□□□ 0.63
CLK3-210ENST00000563112 MAGEB2O15479 319 aa19.01■□□□□ 0.63
CLK3-210ENST00000563112 NPY5RQ15761 445 aa19.01■□□□□ 0.63
CLK3-210ENST00000563112 INF2Q27J81 1249 aa19.01■□□□□ 0.63
CLK3-210ENST00000563112 MIER3Q7Z3K6 550 aa19.01■□□□□ 0.63
CLK3-210ENST00000563112 KIAA0319LQ8IZA0 1049 aa19.01■□□□□ 0.63
CLK3-210ENST00000563112 METTL13Q8N6R0 699 aa19.01■□□□□ 0.63
CLK3-210ENST00000563112 RDM1Q8NG50 284 aa19.01■□□□□ 0.63
CLK3-210ENST00000563112 GDPD5Q8WTR4 605 aa19.01■□□□□ 0.63
CLK3-210ENST00000563112 UNC45AQ9H3U1 944 aa19.01■□□□□ 0.63
CLK3-210ENST00000563112 DDX25Q9UHL0 483 aaKnown RBP19.01■□□□□ 0.63
CLK3-210ENST00000563112 PADI3Q9ULW8 664 aa19.01■□□□□ 0.63
CLK3-210ENST00000563112 GINS2Q9Y248 185 aa19.01■□□□□ 0.63
CLK3-210ENST00000563112 TTC28Q96AY4 2481 aa19■□□□□ 0.63
CLK3-210ENST00000563112 EVPLQ92817 2033 aa19■□□□□ 0.63
CLK3-210ENST00000563112 LPXNO60711 386 aa19■□□□□ 0.63
CLK3-210ENST00000563112 PSMD10O75832 226 aa19■□□□□ 0.63
CLK3-210ENST00000563112 C22orf31O95567 290 aa19■□□□□ 0.63
CLK3-210ENST00000563112 MRPS5P82675 430 aaKnown RBP19■□□□□ 0.63
CLK3-210ENST00000563112 ME3Q16798 604 aa19■□□□□ 0.63
CLK3-210ENST00000563112 LETM2Q2VYF4 491 aa19■□□□□ 0.63
CLK3-210ENST00000563112 KRT40Q6A162 431 aa19■□□□□ 0.63
CLK3-210ENST00000563112 FIBCD1Q8N539 461 aa19■□□□□ 0.63
CLK3-210ENST00000563112 IL27Q8NEV9 243 aa19■□□□□ 0.63
CLK3-210ENST00000563112 GTF3C6Q969F1 213 aa19■□□□□ 0.63
CLK3-210ENST00000563112 MBOAT7Q96N66 472 aa19■□□□□ 0.63
CLK3-210ENST00000563112 NAP1L4Q99733 375 aaKnown RBP19■□□□□ 0.63
CLK3-210ENST00000563112 C17orf80Q9BSJ5 609 aa19■□□□□ 0.63
CLK3-210ENST00000563112 BRMS1Q9HCU9 246 aa19■□□□□ 0.63
CLK3-210ENST00000563112 ZBTB42B2RXF5 422 aa18.99■□□□□ 0.63
CLK3-210ENST00000563112 RPS6KA5O75582 802 aa18.99■□□□□ 0.63
CLK3-210ENST00000563112 CTDNEP1O95476 244 aa18.99■□□□□ 0.63
CLK3-210ENST00000563112 OATP04181 439 aa18.99■□□□□ 0.63
CLK3-210ENST00000563112 GCFC2P16383 781 aaKnown RBP18.99■□□□□ 0.63
CLK3-210ENST00000563112 TMOD1P28289 359 aa18.99■□□□□ 0.63
CLK3-210ENST00000563112 AAK1Q2M2I8 961 aa18.99■□□□□ 0.63
CLK3-210ENST00000563112 NEK8Q86SG6 692 aa18.99■□□□□ 0.63
CLK3-210ENST00000563112 NECAB1Q8N987 351 aa18.99■□□□□ 0.63
CLK3-210ENST00000563112 GJA10Q969M2 543 aa18.99■□□□□ 0.63
CLK3-210ENST00000563112 MAP7D2Q96T17 732 aa18.99■□□□□ 0.63
CLK3-210ENST00000563112 LOXHD1Q8IVV2 1947 aa18.98■□□□□ 0.63
CLK3-210ENST00000563112 MARCH6O60337 910 aa18.98■□□□□ 0.63
CLK3-210ENST00000563112 SEC24BO95487 1268 aa18.98■□□□□ 0.63
CLK3-210ENST00000563112 STAG3L1P0CL83 205 aa18.98■□□□□ 0.63
CLK3-210ENST00000563112 PRKCEQ02156 737 aa18.98■□□□□ 0.63
CLK3-210ENST00000563112 NFX1Q12986 1120 aaKnown RBP18.98■□□□□ 0.63
CLK3-210ENST00000563112 EPC2Q52LR7 807 aa18.98■□□□□ 0.63
CLK3-210ENST00000563112 TMEM192Q8IY95 271 aa18.98■□□□□ 0.63
CLK3-210ENST00000563112 ZNF710Q8N1W2 664 aa18.98■□□□□ 0.63
CLK3-210ENST00000563112 ASB2Q96Q27 587 aa18.98■□□□□ 0.63
CLK3-210ENST00000563112 RNF216Q9NWF9 866 aaPredicted RBP18.98■□□□□ 0.63
CLK3-210ENST00000563112 COG5Q9UP83 839 aa18.98■□□□□ 0.63
CLK3-210ENST00000563112 TTC3P53804 2025 aa18.98■□□□□ 0.63
CLK3-210ENST00000563112 WDR81Q562E7 1941 aa18.98■□□□□ 0.63
CLK3-210ENST00000563112 GPR182O15218 404 aa18.97■□□□□ 0.63
CLK3-210ENST00000563112 ZNF862O60290 1169 aa18.97■□□□□ 0.63
CLK3-210ENST00000563112 KRT2P35908 639 aa18.97■□□□□ 0.63
CLK3-210ENST00000563112 CRYBB1P53674 252 aaPredicted RBP18.97■□□□□ 0.63
CLK3-210ENST00000563112 PTPROQ16827 1216 aa18.97■□□□□ 0.63
CLK3-210ENST00000563112 TMEM266Q2M3C6 531 aa18.97■□□□□ 0.63
CLK3-210ENST00000563112 PPP4R3AQ6IN85 833 aa18.97■□□□□ 0.63
CLK3-210ENST00000563112 EFCAB12Q6NXP0 572 aa18.97■□□□□ 0.63
CLK3-210ENST00000563112 PIK3AP1Q6ZUJ8 805 aa18.97■□□□□ 0.63
CLK3-210ENST00000563112 RTN4RL1Q86UN2 441 aaPredicted RBP18.97■□□□□ 0.63
CLK3-210ENST00000563112 NPAS4Q8IUM7 802 aa18.97■□□□□ 0.63
CLK3-210ENST00000563112 ETNPPLQ8TBG4 499 aa18.97■□□□□ 0.63
CLK3-210ENST00000563112 FAM20AQ96MK3 541 aa18.97■□□□□ 0.63
CLK3-210ENST00000563112 GJB4Q9NTQ9 266 aa18.97■□□□□ 0.63
CLK3-210ENST00000563112 NOC2LQ9Y3T9 749 aaKnown RBP18.97■□□□□ 0.63
CLK3-210ENST00000563112 RWDD3Q9Y3V2 267 aa18.97■□□□□ 0.63
CLK3-210ENST00000563112 COL4A4P53420 1690 aaPredicted RBP18.97■□□□□ 0.63
CLK3-210ENST00000563112 COL4A6Q14031 1691 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 CCNT1O60563 726 aaKnown RBP18.96■□□□□ 0.63
CLK3-210ENST00000563112 DTNBO60941 627 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 LARGE1O95461 756 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 VTNP04004 478 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 FDPSP14324 419 aaKnown RBP18.96■□□□□ 0.63
CLK3-210ENST00000563112 TBC1D8BQ0IIM8 1120 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 GPM6BQ13491 265 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 TRIM29Q14134 588 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 BTG3Q14201 252 aaPredicted RBP18.96■□□□□ 0.63
CLK3-210ENST00000563112 UGCGQ16739 394 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 KIZQ2M2Z5 673 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 XKR3Q5GH77 459 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 OXER1Q8TDS5 423 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 LINC01599Q8WXQ3 324 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 CDHR5Q9HBB8 845 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 LRFN2Q9ULH4 789 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 AKT3Q9Y243 479 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 ADGRA3Q8IWK6 1321 aa18.96■□□□□ 0.63
CLK3-210ENST00000563112 DENND3A2RUS2 1198 aa18.95■□□□□ 0.62
CLK3-210ENST00000563112 H3BNC9 293 aa18.95■□□□□ 0.62
CLK3-210ENST00000563112 SLC37A4O43826 429 aa18.95■□□□□ 0.62
CLK3-210ENST00000563112 DKC1O60832 514 aaKnown RBP eCLIP18.95■□□□□ 0.62
CLK3-210ENST00000563112 DGKIO75912 1065 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms