RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.69■□□□□ 0.58
CDT1-202ENST00000562747 CCDC60Q8IWA6 550 aaPredicted RBP18.69■□□□□ 0.58
CDT1-202ENST00000562747 LMBR1Q8WVP7 490 aa18.69■□□□□ 0.58
CDT1-202ENST00000562747 FAM122AQ96E09 287 aa18.69■□□□□ 0.58
CDT1-202ENST00000562747 TGS1Q96RS0 853 aaKnown RBP18.69■□□□□ 0.58
CDT1-202ENST00000562747 RAD9AQ99638 391 aa18.69■□□□□ 0.58
CDT1-202ENST00000562747 FOXP1Q9H334 677 aaPredicted RBP18.69■□□□□ 0.58
CDT1-202ENST00000562747 C11orf16Q9NQ32 467 aa18.69■□□□□ 0.58
CDT1-202ENST00000562747 ZNF302Q9NR11 478 aa18.69■□□□□ 0.58
CDT1-202ENST00000562747 KAT6AQ92794 2004 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 FAM205CA6NFA0 338 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 RRN3P2A6NIE6 340 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 TBX3O15119 743 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 SFNP31947 248 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 JAK3P52333 1124 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 PLCB4Q15147 1175 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 GRIK4Q16099 956 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 SWSAP1Q6NVH7 229 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 RDM1Q8NG50 284 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 FAM20AQ96MK3 541 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 OSBPL7Q9BZF2 842 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 KCNMB3Q9NPA1 279 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 LMCD1Q9NZU5 365 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 SAMM50Q9Y512 469 aa18.68■□□□□ 0.58
CDT1-202ENST00000562747 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.68■□□□□ 0.58
CDT1-202ENST00000562747 MAFBQ9Y5Q3 323 aaPredicted RBP18.68■□□□□ 0.58
CDT1-202ENST00000562747 POTEB3A0JP26 581 aa18.67■□□□□ 0.58
CDT1-202ENST00000562747 CAND2O75155 1236 aa18.67■□□□□ 0.58
CDT1-202ENST00000562747 IKBKEQ14164 716 aa18.67■□□□□ 0.58
CDT1-202ENST00000562747 PDXDC2PQ6P474 469 aa18.67■□□□□ 0.58
CDT1-202ENST00000562747 POTEBQ6S5H4 581 aa18.67■□□□□ 0.58
CDT1-202ENST00000562747 B3GNT9Q6UX72 402 aa18.67■□□□□ 0.58
CDT1-202ENST00000562747 C17orf80Q9BSJ5 609 aa18.67■□□□□ 0.58
CDT1-202ENST00000562747 UNC45AQ9H3U1 944 aa18.67■□□□□ 0.58
CDT1-202ENST00000562747 UBE2ZQ9H832 354 aaPredicted RBP18.67■□□□□ 0.58
CDT1-202ENST00000562747 DISC1Q9NRI5 854 aa18.67■□□□□ 0.58
CDT1-202ENST00000562747 TRPC6Q9Y210 931 aa18.67■□□□□ 0.58
CDT1-202ENST00000562747 ATG2AQ2TAZ0 1938 aa18.66■□□□□ 0.58
CDT1-202ENST00000562747 MBLAC1A4D2B0 266 aaPredicted RBP18.66■□□□□ 0.58
CDT1-202ENST00000562747 FAM86C2PA6NEL3 165 aa18.66■□□□□ 0.58
CDT1-202ENST00000562747 HBP1O60381 514 aa18.66■□□□□ 0.58
CDT1-202ENST00000562747 INSRRP14616 1297 aa18.66■□□□□ 0.58
CDT1-202ENST00000562747 TAF2Q6P1X5 1199 aa18.66■□□□□ 0.58
CDT1-202ENST00000562747 DBF4BQ8NFT6 615 aa18.66■□□□□ 0.58
CDT1-202ENST00000562747 ATP8B4Q8TF62 1192 aa18.66■□□□□ 0.58
CDT1-202ENST00000562747 GJA10Q969M2 543 aa18.66■□□□□ 0.58
CDT1-202ENST00000562747 TUBE1Q9UJT0 475 aa18.66■□□□□ 0.58
CDT1-202ENST00000562747 NLRC5Q86WI3 1866 aa18.66■□□□□ 0.58
CDT1-202ENST00000562747 CHMP2AO43633 222 aa18.65■□□□□ 0.58
CDT1-202ENST00000562747 EFCAB14O75071 495 aa18.65■□□□□ 0.58
CDT1-202ENST00000562747 RPLP2P05387 115 aaKnown RBP18.65■□□□□ 0.58
CDT1-202ENST00000562747 GJB2P29033 226 aa18.65■□□□□ 0.58
CDT1-202ENST00000562747 THPOP40225 353 aa18.65■□□□□ 0.58
CDT1-202ENST00000562747 MARCH8Q5T0T0 291 aa18.65■□□□□ 0.58
CDT1-202ENST00000562747 MIER3Q7Z3K6 550 aa18.65■□□□□ 0.58
CDT1-202ENST00000562747 RPAINQ86UA6 219 aa18.65■□□□□ 0.58
CDT1-202ENST00000562747 POTEDQ86YR6 584 aa18.65■□□□□ 0.58
CDT1-202ENST00000562747 SLFN12Q8IYM2 578 aa18.65■□□□□ 0.58
CDT1-202ENST00000562747 BBXQ8WY36 941 aaPredicted RBP18.65■□□□□ 0.58
CDT1-202ENST00000562747 GABBR1Q9UBS5 961 aa18.65■□□□□ 0.58
CDT1-202ENST00000562747 SMC3Q9UQE7 1217 aa18.65■□□□□ 0.58
CDT1-202ENST00000562747 IGSF9BQ9UPX0 1349 aa18.65■□□□□ 0.58
CDT1-202ENST00000562747 COL1A2P08123 1366 aa18.65■□□□□ 0.58
CDT1-202ENST00000562747 MYH9P35579 1960 aaKnown RBP18.64■□□□□ 0.58
CDT1-202ENST00000562747 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.64■□□□□ 0.57
CDT1-202ENST00000562747 MARCH6O60337 910 aa18.64■□□□□ 0.57
CDT1-202ENST00000562747 BAG4O95429 457 aaKnown RBP18.64■□□□□ 0.57
CDT1-202ENST00000562747 ATP4AP20648 1035 aa18.64■□□□□ 0.57
CDT1-202ENST00000562747 HTRA4P83105 476 aaPredicted RBP18.64■□□□□ 0.57
CDT1-202ENST00000562747 PPP2R5CQ13362 524 aa18.64■□□□□ 0.57
CDT1-202ENST00000562747 CUL4AQ13619 759 aa18.64■□□□□ 0.57
CDT1-202ENST00000562747 GNL2Q13823 731 aaKnown RBP18.64■□□□□ 0.57
CDT1-202ENST00000562747 TMEM31Q5JXX7 168 aa18.64■□□□□ 0.57
CDT1-202ENST00000562747 NOSTRINQ8IVI9 506 aa18.64■□□□□ 0.57
CDT1-202ENST00000562747 CKAP2LQ8IYA6 745 aa18.64■□□□□ 0.57
CDT1-202ENST00000562747 SP7Q8TDD2 431 aaPredicted RBP18.64■□□□□ 0.57
CDT1-202ENST00000562747 HAS1Q92839 578 aa18.64■□□□□ 0.57
CDT1-202ENST00000562747 FAM167AQ96KS9 214 aa18.64■□□□□ 0.57
CDT1-202ENST00000562747 COL4A6Q14031 1691 aa18.63■□□□□ 0.57
CDT1-202ENST00000562747 WDR81Q562E7 1941 aa18.63■□□□□ 0.57
CDT1-202ENST00000562747 RSPH10B2B2RC85 870 aa18.63■□□□□ 0.57
CDT1-202ENST00000562747 NEMFO60524 1076 aa18.63■□□□□ 0.57
CDT1-202ENST00000562747 RSPH10BP0C881 870 aa18.63■□□□□ 0.57
CDT1-202ENST00000562747 U2AF2P26368 475 aaKnown RBP eCLIP18.63■□□□□ 0.57
CDT1-202ENST00000562747 IGBP1P78318 339 aa18.63■□□□□ 0.57
CDT1-202ENST00000562747 ORC2Q13416 577 aaPredicted RBP18.63■□□□□ 0.57
CDT1-202ENST00000562747 PLEKHG4Q58EX7 1191 aa18.63■□□□□ 0.57
CDT1-202ENST00000562747 ZNF484Q5JVG2 852 aa18.63■□□□□ 0.57
CDT1-202ENST00000562747 RSPH3Q86UC2 560 aa18.63■□□□□ 0.57
CDT1-202ENST00000562747 MYOCDQ8IZQ8 938 aa18.63■□□□□ 0.57
CDT1-202ENST00000562747 FBXO22Q8NEZ5 403 aa18.63■□□□□ 0.57
CDT1-202ENST00000562747 VAV3Q9UKW4 847 aa18.63■□□□□ 0.57
CDT1-202ENST00000562747 KCNA5P22460 613 aa18.62■□□□□ 0.57
CDT1-202ENST00000562747 TRAPPC10P48553 1259 aa18.62■□□□□ 0.57
CDT1-202ENST00000562747 CALCRLQ16602 461 aa18.62■□□□□ 0.57
CDT1-202ENST00000562747 RUFY4Q6ZNE9 571 aa18.62■□□□□ 0.57
CDT1-202ENST00000562747 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.62■□□□□ 0.57
CDT1-202ENST00000562747 CEP131Q9UPN4 1083 aa18.62■□□□□ 0.57
CDT1-202ENST00000562747 INSL6Q9Y581 213 aa18.62■□□□□ 0.57
CDT1-202ENST00000562747 PCDHA2Q9Y5H9 948 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms