RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 UBE4BO95155 1302 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 SYNRGQ9UMZ2 1314 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 BECN2A8MW95 431 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 PSMA7O14818 248 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 ZBTB39O15060 712 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 DGAT1O75907 488 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 KIF20AO95235 890 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 MAPTP10636 758 aaKnown RBP15.45■□□□□ 0.06
CLK3-209ENST00000562670 CYBAP13498 195 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 CD44P16070 742 aaKnown RBP15.45■□□□□ 0.06
CLK3-209ENST00000562670 HSPA6P17066 643 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 ATP4AP20648 1035 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 RTP1P59025 263 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 TNFAIP2Q03169 654 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 PRKCZQ05513 592 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 STK4Q13043 487 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 PAK1Q13153 545 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 MAPK7Q13164 816 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 NCAPHQ15003 741 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 MFSD14CQ5VZR4 134 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 ISM2Q6H9L7 571 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 LUZP1Q86V48 1076 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 AOPEPQ8N6M6 819 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 MCPH1Q8NEM0 835 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 ATP8B4Q8TF62 1192 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 BBXQ8WY36 941 aaPredicted RBP15.45■□□□□ 0.06
CLK3-209ENST00000562670 COPS5Q92905 334 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 DRC1Q96MC2 740 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 C17orf75Q9HAS0 396 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 PARVGQ9HBI0 331 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 CYP26B1Q9NR63 512 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 SRRDQ9UH36 339 aa15.45■□□□□ 0.06
CLK3-209ENST00000562670 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.44■□□□□ 0.06
CLK3-209ENST00000562670 GOLGA6L19H0YKK7 550 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 GAS2O43903 313 aaKnown RBP15.44■□□□□ 0.06
CLK3-209ENST00000562670 PPFIA4O75335 1185 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 FAM13AO94988 1023 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 AKR1A1P14550 325 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 CYP2C19P33261 490 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 RFC5P40937 340 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 PRCPP42785 496 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 TPM4P67936 248 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 MAP2K1Q02750 393 aaPredicted RBP15.44■□□□□ 0.06
CLK3-209ENST00000562670 TARBP2Q15633 366 aaKnown RBP15.44■□□□□ 0.06
CLK3-209ENST00000562670 BMT2Q1RMZ1 405 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 XKR9Q5GH70 373 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 EXOC8Q8IYI6 725 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 SLC17A8Q8NDX2 589 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 OR6J1Q8NGC5 347 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 TRIB2Q92519 343 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 KCNN1Q92952 543 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 CEP170P1Q96L14 293 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 CEP89Q96ST8 783 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 PDLIM7Q9NR12 457 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 NRBP2Q9NSY0 501 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 ERAP1Q9NZ08 941 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 SEPT9Q9UHD8 586 aaPredicted RBP15.44■□□□□ 0.06
CLK3-209ENST00000562670 FAM184BQ9ULE4 1060 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 GABRQQ9UN88 632 aa15.44■□□□□ 0.06
CLK3-209ENST00000562670 NPHP3-ACAD11A0A0J9YXS1 232 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 A6NJR5 290 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 EIF3DO15371 548 aaKnown RBP eCLIP15.43■□□□□ 0.06
CLK3-209ENST00000562670 ADCY6O43306 1168 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 SORBS3O60504 671 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 USO1O60763 962 aaKnown RBP15.43■□□□□ 0.06
CLK3-209ENST00000562670 FKTNO75072 461 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 LGALS2P05162 132 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 MMP3P08254 477 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 SCP2P22307 547 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 NKX3-2P78367 333 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 HTRA3P83110 453 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 CAP1Q01518 475 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 ALCAMQ13740 583 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 HERC4Q5GLZ8 1057 aaPredicted RBP15.43■□□□□ 0.06
CLK3-209ENST00000562670 TMEM63BQ5T3F8 832 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 UTP14CQ5TAP6 766 aaKnown RBP15.43■□□□□ 0.06
CLK3-209ENST00000562670 PLA2G4FQ68DD2 849 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 SARM1Q6SZW1 724 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 EPM2AIP1Q7L775 607 aaPredicted RBP15.43■□□□□ 0.06
CLK3-209ENST00000562670 SFR1Q86XK3 245 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 SMYD4Q8IYR2 804 aaPredicted RBP15.43■□□□□ 0.06
CLK3-209ENST00000562670 DAW1Q8N136 415 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 PXYLP1Q8TE99 480 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 AFG1LQ8WV93 481 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 KIFAP3Q92845 792 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 DHX33Q9H6R0 707 aaKnown RBP15.43■□□□□ 0.06
CLK3-209ENST00000562670 ATP6V0A4Q9HBG4 840 aa15.43■□□□□ 0.06
CLK3-209ENST00000562670 LARSQ9P2J5 1176 aaKnown RBP15.43■□□□□ 0.06
CLK3-209ENST00000562670 ZNF215Q9UL58 517 aaPredicted RBP15.43■□□□□ 0.06
CLK3-209ENST00000562670 COL1A2P08123 1366 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 BICDL2A1A5D9 508 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 RSPH10B2B2RC85 870 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 HBP1O60381 514 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 HIP1RO75146 1068 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 RSPH10BP0C881 870 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 CCNE1P24864 410 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 NPEPPSP55786 919 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 DGKDQ16760 1214 aa15.42■□□□□ 0.06
CLK3-209ENST00000562670 GJC2Q5T442 439 aaPredicted RBP15.42■□□□□ 0.06
CLK3-209ENST00000562670 SPATA1Q5VX52 437 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms