RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 ARHGEF15O94989 841 aa20.08■□□□□ 0.81
CMTM3-204ENST00000562357 C22orf31O95567 290 aa20.08■□□□□ 0.81
CMTM3-204ENST00000562357 CD52P31358 61 aa20.08■□□□□ 0.81
CMTM3-204ENST00000562357 HTRA4P83105 476 aaPredicted RBP20.08■□□□□ 0.81
CMTM3-204ENST00000562357 PPP4R3AQ6IN85 833 aa20.08■□□□□ 0.81
CMTM3-204ENST00000562357 FAM20AQ96MK3 541 aa20.08■□□□□ 0.81
CMTM3-204ENST00000562357 SAMD11Q96NU1 681 aa20.08■□□□□ 0.81
CMTM3-204ENST00000562357 UPF2Q9HAU5 1272 aaKnown RBP20.08■□□□□ 0.81
CMTM3-204ENST00000562357 GJB4Q9NTQ9 266 aa20.08■□□□□ 0.81
CMTM3-204ENST00000562357 MICAL3Q7RTP6 2002 aa20.07■□□□□ 0.8
CMTM3-204ENST00000562357 RFXAPO00287 272 aa20.07■□□□□ 0.8
CMTM3-204ENST00000562357 DLL1O00548 723 aa20.07■□□□□ 0.8
CMTM3-204ENST00000562357 ERVK-21P61565 698 aa20.07■□□□□ 0.8
CMTM3-204ENST00000562357 KIAA0319LQ8IZA0 1049 aa20.07■□□□□ 0.8
CMTM3-204ENST00000562357 ETNPPLQ8TBG4 499 aa20.07■□□□□ 0.8
CMTM3-204ENST00000562357 OXER1Q8TDS5 423 aa20.07■□□□□ 0.8
CMTM3-204ENST00000562357 GJA10Q969M2 543 aa20.07■□□□□ 0.8
CMTM3-204ENST00000562357 AGO3Q9H9G7 860 aaKnown RBP20.07■□□□□ 0.8
CMTM3-204ENST00000562357 ZBTB42B2RXF5 422 aa20.06■□□□□ 0.8
CMTM3-204ENST00000562357 SLC37A4O43826 429 aa20.06■□□□□ 0.8
CMTM3-204ENST00000562357 DKC1O60832 514 aaKnown RBP eCLIP20.06■□□□□ 0.81e-9■■■□□ 17.2
CMTM3-204ENST00000562357 DTNBO60941 627 aa20.06■□□□□ 0.8
CMTM3-204ENST00000562357 RPS6KA5O75582 802 aa20.06■□□□□ 0.8
CMTM3-204ENST00000562357 FDPSP14324 419 aaKnown RBP20.06■□□□□ 0.8
CMTM3-204ENST00000562357 NFX1Q12986 1120 aaKnown RBP20.06■□□□□ 0.8
CMTM3-204ENST00000562357 SAFBQ15424 915 aaKnown RBP eCLIP20.06■□□□□ 0.8
CMTM3-204ENST00000562357 SKIV2LQ15477 1246 aaKnown RBP20.06■□□□□ 0.8
CMTM3-204ENST00000562357 C8orf34Q49A92 452 aa20.06■□□□□ 0.8
CMTM3-204ENST00000562357 ZNF710Q8N1W2 664 aa20.06■□□□□ 0.8
CMTM3-204ENST00000562357 SP7Q8TDD2 431 aaPredicted RBP20.06■□□□□ 0.8
CMTM3-204ENST00000562357 ZSCAN31Q96LW9 406 aaPredicted RBP20.06■□□□□ 0.8
CMTM3-204ENST00000562357 RNF216Q9NWF9 866 aaPredicted RBP20.06■□□□□ 0.8
CMTM3-204ENST00000562357 THEGQ9P2T0 379 aa20.06■□□□□ 0.8
CMTM3-204ENST00000562357 SEPT9Q9UHD8 586 aaPredicted RBP20.06■□□□□ 0.8
CMTM3-204ENST00000562357 PADI3Q9ULW8 664 aa20.06■□□□□ 0.8
CMTM3-204ENST00000562357 AKT3Q9Y243 479 aa20.06■□□□□ 0.8
CMTM3-204ENST00000562357 EPOPA6NHQ4 379 aa20.05■□□□□ 0.8
CMTM3-204ENST00000562357 ENPP3O14638 875 aa20.05■□□□□ 0.8
CMTM3-204ENST00000562357 TBX3O15119 743 aa20.05■□□□□ 0.8
CMTM3-204ENST00000562357 JAK2O60674 1132 aa20.05■□□□□ 0.8
CMTM3-204ENST00000562357 BAG4O95429 457 aaKnown RBP20.05■□□□□ 0.8
CMTM3-204ENST00000562357 MMP1P03956 469 aa20.05■□□□□ 0.8
CMTM3-204ENST00000562357 POU3F3P20264 500 aaPredicted RBP20.05■□□□□ 0.8
CMTM3-204ENST00000562357 FOSBP53539 338 aa20.05■□□□□ 0.8
CMTM3-204ENST00000562357 TBC1D8BQ0IIM8 1120 aa20.05■□□□□ 0.8
CMTM3-204ENST00000562357 GRB10Q13322 594 aa20.05■□□□□ 0.8
CMTM3-204ENST00000562357 XKR3Q5GH77 459 aa20.05■□□□□ 0.8
CMTM3-204ENST00000562357 FBXO22Q8NEZ5 403 aa20.05■□□□□ 0.8
CMTM3-204ENST00000562357 SCLT1Q96NL6 688 aa20.05■□□□□ 0.8
CMTM3-204ENST00000562357 MTCH2Q9Y6C9 303 aa20.05■□□□□ 0.8
CMTM3-204ENST00000562357 PTPRSQ13332 1948 aa20.05■□□□□ 0.8
CMTM3-204ENST00000562357 GPR182O15218 404 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 ZNF862O60290 1169 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 STAG3L1P0CL83 205 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 CLCN3P51790 818 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 CRYBB1P53674 252 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-204ENST00000562357 NR5A1Q13285 461 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 UGCGQ16739 394 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 KIZQ2M2Z5 673 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 EFCAB12Q6NXP0 572 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 CCDC83Q8IWF9 413 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 DIS3L2Q8IYB7 885 aaKnown RBP20.04■□□□□ 0.8
CMTM3-204ENST00000562357 SLFN12Q8IYM2 578 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 FIBCD1Q8N539 461 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 GDPD5Q8WTR4 605 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 LLPHQ9BRT6 129 aaKnown RBP20.04■□□□□ 0.8
CMTM3-204ENST00000562357 KCNMB3Q9NPA1 279 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 SH2B1Q9NRF2 756 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-204ENST00000562357 LMCD1Q9NZU5 365 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 CHD9Q3L8U1 2897 aa20.04■□□□□ 0.8
CMTM3-204ENST00000562357 MYH9P35579 1960 aaKnown RBP20.03■□□□□ 0.8
CMTM3-204ENST00000562357 VTNP04004 478 aa20.03■□□□□ 0.8
CMTM3-204ENST00000562357 PSMC5P62195 406 aa20.03■□□□□ 0.8
CMTM3-204ENST00000562357 PPP2R5CQ13362 524 aa20.03■□□□□ 0.8
CMTM3-204ENST00000562357 TMEM266Q2M3C6 531 aa20.03■□□□□ 0.8
CMTM3-204ENST00000562357 KRT40Q6A162 431 aa20.03■□□□□ 0.8
CMTM3-204ENST00000562357 SPRED2Q7Z698 418 aa20.03■□□□□ 0.8
CMTM3-204ENST00000562357 NPAS4Q8IUM7 802 aa20.03■□□□□ 0.8
CMTM3-204ENST00000562357 IL27Q8NEV9 243 aa20.03■□□□□ 0.8
CMTM3-204ENST00000562357 PPP1R16BQ96T49 567 aa20.03■□□□□ 0.8
CMTM3-204ENST00000562357 SUGCTQ9HAC7 445 aa20.03■□□□□ 0.8
CMTM3-204ENST00000562357 LRFN2Q9ULH4 789 aa20.03■□□□□ 0.8
CMTM3-204ENST00000562357 RWDD3Q9Y3V2 267 aa20.03■□□□□ 0.8
CMTM3-204ENST00000562357 ADGRA3Q8IWK6 1321 aa20.02■□□□□ 0.8
CMTM3-204ENST00000562357 DENND3A2RUS2 1198 aa20.02■□□□□ 0.8
CMTM3-204ENST00000562357 RBAK-RBAKDNI3L0D1 243 aa20.02■□□□□ 0.8
CMTM3-204ENST00000562357 QARSP47897 775 aaKnown RBP20.02■□□□□ 0.8
CMTM3-204ENST00000562357 DNM2P50570 870 aa20.02■□□□□ 0.8
CMTM3-204ENST00000562357 HMGN5P82970 282 aaKnown RBP20.02■□□□□ 0.8
CMTM3-204ENST00000562357 PTPROQ16827 1216 aa20.02■□□□□ 0.8
CMTM3-204ENST00000562357 MTERF2Q49AM1 385 aa20.02■□□□□ 0.8
CMTM3-204ENST00000562357 B3GNT9Q6UX72 402 aa20.02■□□□□ 0.8
CMTM3-204ENST00000562357 LRRC71Q8N4P6 559 aa20.02■□□□□ 0.8
CMTM3-204ENST00000562357 FAM184AQ8NB25 1140 aa20.02■□□□□ 0.8
CMTM3-204ENST00000562357 ATXN2LQ8WWM7 1075 aaKnown RBP20.02■□□□□ 0.8
CMTM3-204ENST00000562357 SYMPKQ92797 1274 aaKnown RBP20.02■□□□□ 0.8
CMTM3-204ENST00000562357 OSMRQ99650 979 aa20.02■□□□□ 0.8
CMTM3-204ENST00000562357 C17orf80Q9BSJ5 609 aa20.02■□□□□ 0.8
CMTM3-204ENST00000562357 NOC2LQ9Y3T9 749 aaKnown RBP20.02■□□□□ 0.8
CMTM3-204ENST00000562357 DDX11L8A8MPP1 907 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms