RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 COL1A2P08123 1366 aa14.32□□□□□ -0.12
CHRNA3-208ENST00000561128 ARID2Q68CP9 1835 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 EVPLQ92817 2033 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 SMIM35A0A1B0GVV1 85 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 WDR64B1ANS9 1081 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 UPP2O95045 317 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 VTNP04004 478 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 PSAPP07602 524 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 GUCY1B3Q02153 619 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 GRB10Q13322 594 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 DRP2Q13474 957 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 GALNT17Q6IS24 598 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 TSHZ1Q6ZSZ6 1077 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 CKAP2LQ8IYA6 745 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 SMAP1Q8IYB5 467 aaPredicted RBP14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 MICALL1Q8N3F8 863 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 LRRC71Q8N4P6 559 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 SP7Q8TDD2 431 aaPredicted RBP14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 HAS1Q92839 578 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 CEP89Q96ST8 783 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 GAS2L1Q99501 681 aaPredicted RBP14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 RIT2Q99578 217 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 TEKT3Q9BXF9 490 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 RC3H2Q9HBD1 1191 aaKnown RBP14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 SAMM50Q9Y512 469 aa14.31□□□□□ -0.12
CHRNA3-208ENST00000561128 PRUNE2Q8WUY3 3088 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 CCDC194A0A1B0GVG4 234 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 BTBD18B2RXH4 712 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 MMP1P03956 469 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 AMHP03971 560 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 OATP04181 439 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 GATMP50440 423 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 SLC26A2P50443 739 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 MOXD1Q6UVY6 613 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 NEK8Q86SG6 692 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 BANK1Q8NDB2 785 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 RAD9AQ99638 391 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 ZBED2Q9BTP6 218 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 CELF4Q9BZC1 486 aaKnown RBP14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 NOC2LQ9Y3T9 749 aaKnown RBP14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 MTCH2Q9Y6C9 303 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 UNC80Q8N2C7 3258 aa14.3□□□□□ -0.12
CHRNA3-208ENST00000561128 EFCAB14O75071 495 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 GPR32O75388 356 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 KRT2P35908 639 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 SPIRE1Q08AE8 756 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 TARBP2Q15633 366 aaKnown RBP14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 KIZQ2M2Z5 673 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 ZNF484Q5JVG2 852 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 PLA2G4FQ68DD2 849 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 MIER3Q7Z3K6 550 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 DIS3L2Q8IYB7 885 aaKnown RBP14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 FAM177A1Q8N128 213 aaPredicted RBP14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 CRIPAKQ8N1N5 446 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 ZNF579Q8NAF0 562 aaKnown RBP14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 BBXQ8WY36 941 aaPredicted RBP14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 TOP1MTQ969P6 601 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 SUGCTQ9HAC7 445 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 ERVK-5Q9HDB9 667 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 PADI3Q9ULW8 664 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 GINS2Q9Y248 185 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 KDM3AQ9Y4C1 1321 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 TRANK1O15050 2925 aa14.29□□□□□ -0.12
CHRNA3-208ENST00000561128 ENPP3O14638 875 aa14.28□□□□□ -0.12
CHRNA3-208ENST00000561128 CCNT1O60563 726 aaKnown RBP14.28□□□□□ -0.12
CHRNA3-208ENST00000561128 RBM25P49756 843 aaKnown RBP14.28□□□□□ -0.12
CHRNA3-208ENST00000561128 JAK3P52333 1124 aa14.28□□□□□ -0.12
CHRNA3-208ENST00000561128 ERVK-21P61565 698 aa14.28□□□□□ -0.12
CHRNA3-208ENST00000561128 RALGAPA2Q2PPJ7 1873 aa14.28□□□□□ -0.12
CHRNA3-208ENST00000561128 RSPH3Q86UC2 560 aa14.28□□□□□ -0.12
CHRNA3-208ENST00000561128 FAM228AQ86W67 206 aa14.28□□□□□ -0.12
CHRNA3-208ENST00000561128 APBB2Q92870 758 aa14.28□□□□□ -0.12
CHRNA3-208ENST00000561128 OSMRQ99650 979 aa14.28□□□□□ -0.12
CHRNA3-208ENST00000561128 C22orf23Q9BZE7 217 aa14.28□□□□□ -0.12
CHRNA3-208ENST00000561128 HCSTQ9UBK5 93 aa14.28□□□□□ -0.12
CHRNA3-208ENST00000561128 LIMCH1Q9UPQ0 1083 aa14.28□□□□□ -0.12
CHRNA3-208ENST00000561128 KIF28PB7ZC32 967 aa14.27□□□□□ -0.13
CHRNA3-208ENST00000561128 PPP2R5CQ13362 524 aa14.27□□□□□ -0.13
CHRNA3-208ENST00000561128 PPP4R3AQ6IN85 833 aa14.27□□□□□ -0.13
CHRNA3-208ENST00000561128 COL25A1Q9BXS0 654 aaPredicted RBP14.27□□□□□ -0.13
CHRNA3-208ENST00000561128 TMEM60Q9H2L4 133 aa14.27□□□□□ -0.13
CHRNA3-208ENST00000561128 ADAMTS10Q9H324 1103 aa14.27□□□□□ -0.13
CHRNA3-208ENST00000561128 SEPT9Q9UHD8 586 aaPredicted RBP14.27□□□□□ -0.13
CHRNA3-208ENST00000561128 TCEAL9Q9UHQ7 104 aa14.27□□□□□ -0.13
CHRNA3-208ENST00000561128 PRRC2BQ5JSZ5 2229 aaKnown RBP14.27□□□□□ -0.13
CHRNA3-208ENST00000561128 TTC3P53804 2025 aa14.27□□□□□ -0.13
CHRNA3-208ENST00000561128 MYO9BQ13459 2157 aa14.26□□□□□ -0.13
CHRNA3-208ENST00000561128 ZBTB39O15060 712 aa14.26□□□□□ -0.13
CHRNA3-208ENST00000561128 IBSPP21815 317 aaPredicted RBP14.26□□□□□ -0.13
CHRNA3-208ENST00000561128 FGFR4P22455 802 aa14.26□□□□□ -0.13
CHRNA3-208ENST00000561128 SFNP31947 248 aa14.26□□□□□ -0.13
CHRNA3-208ENST00000561128 MTERF2Q49AM1 385 aa14.26□□□□□ -0.13
CHRNA3-208ENST00000561128 IER5Q5VY09 327 aa14.26□□□□□ -0.13
CHRNA3-208ENST00000561128 EFCAB12Q6NXP0 572 aa14.26□□□□□ -0.13
CHRNA3-208ENST00000561128 ANO5Q75V66 913 aa14.26□□□□□ -0.13
CHRNA3-208ENST00000561128 METTL13Q8N6R0 699 aa14.26□□□□□ -0.13
CHRNA3-208ENST00000561128 TGS1Q96RS0 853 aaKnown RBP14.26□□□□□ -0.13
CHRNA3-208ENST00000561128 YME1L1Q96TA2 773 aa14.26□□□□□ -0.13
CHRNA3-208ENST00000561128 RGL1Q9NZL6 768 aa14.26□□□□□ -0.13
CHRNA3-208ENST00000561128 INSL6Q9Y581 213 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms