RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 EPHA7Q15375 998 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 KIAA0753Q2KHM9 967 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 AXDND1Q5T1B0 1012 aaPredicted RBP5.98□□□□□ -1.45
VPS13C-209ENST00000560637 EFCAB12Q6NXP0 572 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 KCNK18Q7Z418 384 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 TLK2Q86UE8 772 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 GLYCTKQ8IVS8 523 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 ANKS1AQ92625 1134 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 CNOT6LQ96LI5 555 aaKnown RBP5.98□□□□□ -1.45
VPS13C-209ENST00000560637 RPS6KC1Q96S38 1066 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 MTRQ99707 1265 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 TINF2Q9BSI4 451 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 RUSC1Q9BVN2 902 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 SUCLA2Q9P2R7 463 aaPredicted RBP5.98□□□□□ -1.45
VPS13C-209ENST00000560637 ZNF214Q9UL59 606 aaPredicted RBP5.98□□□□□ -1.45
VPS13C-209ENST00000560637 FAM184BQ9ULE4 1060 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 PIN4Q9Y237 131 aaKnown RBP5.98□□□□□ -1.45
VPS13C-209ENST00000560637 MYH13Q9UKX3 1938 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 MYO7AQ13402 2215 aa5.98□□□□□ -1.45
VPS13C-209ENST00000560637 KBTBD13C9JR72 458 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 H3BRB1 525 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 FGRP09769 529 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 SKILP12757 684 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 ZSCAN20P17040 1043 aaPredicted RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 UBA1P22314 1058 aaKnown RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 GJA5P36382 358 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 THPOP40225 353 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 NT5C2P49902 561 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 PTPAQ15257 358 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 TAF12Q16514 161 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 ZNF568Q3ZCX4 644 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 WDR44Q5JSH3 913 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 RRAGAQ7L523 313 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 USP37Q86T82 979 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 RSPH3Q86UC2 560 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 FAM84AQ96KN4 292 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 PSMB7Q99436 277 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 MSTO1Q9BUK6 570 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 SENP6Q9GZR1 1112 aaPredicted RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 TUT1Q9H6E5 874 aaKnown RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 XPNPEP3Q9NQH7 507 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 NRBP1Q9UHY1 535 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 ZC3H4Q9UPT8 1303 aaKnown RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 SNED1Q8TER0 1413 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 COL4A1P02462 1669 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 ESYT2A0FGR8 921 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 CCDC85CA6NKD9 419 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 GCLMP48507 274 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 VEGFBP49765 207 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 MMP14P50281 582 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 MAPK6Q16659 721 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 PAN2Q504Q3 1202 aaKnown RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 GLRA4Q5JXX5 417 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 HAUS6Q7Z4H7 955 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 RIOX2Q8IUF8 465 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 FAM193BQ96PV7 902 aaPredicted RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 TRIM9Q9C026 710 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 JADE2Q9NQC1 790 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 KLK14Q9P0G3 267 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 STK17AQ9UEE5 414 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 LUC7L2Q9Y383 392 aaKnown RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 A0A087X0B3 334 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 STK25O00506 426 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 CLDN3O15551 220 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 ALDH1A1P00352 501 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 INSRRP14616 1297 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 KLRC1P26715 233 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 YARSP54577 528 aaKnown RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 RNASE9P60153 205 aaKnown RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 IFNL1Q8IU54 200 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 CCDC60Q8IWA6 550 aaPredicted RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 FAM186BQ8IYM0 893 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 RABGGTAQ92696 567 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 DPF3Q92784 378 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 L3MBTL3Q96JM7 780 aaPredicted RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 GSDMAQ96QA5 445 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 OSMRQ99650 979 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 TARS2Q9BW92 718 aaKnown RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 LSM14BQ9BX40 385 aaKnown RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 GINM1Q9NU53 330 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 MTUS1Q9ULD2 1270 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 LRFN2Q9ULH4 789 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 TNRC6CQ9HCJ0 1690 aaKnown RBP5.97□□□□□ -1.45
VPS13C-209ENST00000560637 SPEF2Q9C093 1822 aa5.97□□□□□ -1.45
VPS13C-209ENST00000560637 C4AP0C0L4 1744 aa5.96□□□□□ -1.45
VPS13C-209ENST00000560637 IGKV6D-41A0A0C4DH26 115 aa5.96□□□□□ -1.45
VPS13C-209ENST00000560637 A0A0G2JLL6 359 aaPredicted RBP5.96□□□□□ -1.45
VPS13C-209ENST00000560637 ABCB4P21439 1286 aa5.96□□□□□ -1.45
VPS13C-209ENST00000560637 SFNP31947 248 aa5.96□□□□□ -1.45
VPS13C-209ENST00000560637 APLP1P51693 650 aa5.96□□□□□ -1.45
VPS13C-209ENST00000560637 POLR2FP61218 127 aaKnown RBP5.96□□□□□ -1.45
VPS13C-209ENST00000560637 FKBP1BP68106 108 aa5.96□□□□□ -1.45
VPS13C-209ENST00000560637 MAP2K1Q02750 393 aaPredicted RBP5.96□□□□□ -1.45
VPS13C-209ENST00000560637 GRB10Q13322 594 aa5.96□□□□□ -1.45
VPS13C-209ENST00000560637 TFDP1Q14186 410 aa5.96□□□□□ -1.45
VPS13C-209ENST00000560637 DGKDQ16760 1214 aa5.96□□□□□ -1.45
VPS13C-209ENST00000560637 XKR3Q5GH77 459 aa5.96□□□□□ -1.45
VPS13C-209ENST00000560637 PRRT2Q7Z6L0 340 aaPredicted RBP5.96□□□□□ -1.45
VPS13C-209ENST00000560637 VPS36Q86VN1 386 aa5.96□□□□□ -1.45
VPS13C-209ENST00000560637 MICAL1Q8TDZ2 1067 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms