RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SMARCC2Q8TAQ2 1214 aa14.73□□□□□ -0.05
RABGGTA-213ENST00000560127 TRAPPC12Q8WVT3 735 aa14.73□□□□□ -0.05
RABGGTA-213ENST00000560127 MRPS27Q92552 414 aaKnown RBP14.73□□□□□ -0.05
RABGGTA-213ENST00000560127 GPRASP2Q96D09 838 aa14.73□□□□□ -0.05
RABGGTA-213ENST00000560127 TCF25Q9BQ70 676 aa14.73□□□□□ -0.05
RABGGTA-213ENST00000560127 CNNM2Q9H8M5 875 aa14.73□□□□□ -0.05
RABGGTA-213ENST00000560127 CHD8Q9HCK8 2581 aa14.73□□□□□ -0.05
RABGGTA-213ENST00000560127 MED19A0JLT2 244 aaPredicted RBP14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 MEIS2O14770 477 aa14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 ITGB5P18084 799 aa14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 KRT76Q01546 638 aa14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 PLCB3Q01970 1234 aa14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 CWF19L1Q69YN2 538 aaKnown RBP14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 CWC27Q6UX04 472 aaKnown RBP14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 PIBF1Q8WXW3 757 aa14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 NECTIN4Q96NY8 510 aa14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 DSCC1Q9BVC3 393 aa14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 ADAM7Q9H2U9 754 aa14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 SENP2Q9HC62 589 aa14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 ENTPD7Q9NQZ7 604 aa14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 RGS18Q9NS28 235 aa14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 PKD2L1Q9P0L9 805 aa14.72□□□□□ -0.05
RABGGTA-213ENST00000560127 C9IYK1 514 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 PIK3CDO00329 1044 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 FGFR1P11362 822 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 LAG3P18627 525 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 TPRNQ4KMQ1 711 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 CES5AQ6NT32 575 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 SLC24A5Q71RS6 500 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 NME8Q8N427 588 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 CASP10Q92851 521 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 CDHR1Q96JP9 859 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 ADAM2Q99965 735 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 MFSD1Q9H3U5 465 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 NGRNQ9NPE2 291 aaKnown RBP14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 C1orf112Q9NSG2 853 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 PUF60Q9UHX1 559 aaKnown RBP14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 NOC2LQ9Y3T9 749 aaKnown RBP14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 HCFC2Q9Y5Z7 792 aa14.71□□□□□ -0.05
RABGGTA-213ENST00000560127 DOCK8Q8NF50 2099 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 CHD6Q8TD26 2715 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 SMIM35A0A1B0GVV1 85 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 PI15O43692 258 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 WEE2P0C1S8 567 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 PDE4AP27815 886 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 ITIH3Q06033 890 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 TROAPQ12815 778 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 PLCB4Q15147 1175 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 LRRC55Q6ZSA7 311 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 ZDHHC14Q8IZN3 488 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 TMEM40Q8WWA1 233 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 CUL5Q93034 780 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 RMDN1Q96DB5 314 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 CDHR5Q9HBB8 845 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 LIMD1Q9UGP4 676 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 UBIAD1Q9Y5Z9 338 aa14.7□□□□□ -0.06
RABGGTA-213ENST00000560127 DENND3A2RUS2 1198 aa14.69□□□□□ -0.06
RABGGTA-213ENST00000560127 RPS6KA5O75582 802 aa14.69□□□□□ -0.06
RABGGTA-213ENST00000560127 NPR3P17342 541 aa14.69□□□□□ -0.06
RABGGTA-213ENST00000560127 PBX3P40426 434 aa14.69□□□□□ -0.06
RABGGTA-213ENST00000560127 FAM189BP81408 668 aa14.69□□□□□ -0.06
RABGGTA-213ENST00000560127 MTMR1Q13613 665 aa14.69□□□□□ -0.06
RABGGTA-213ENST00000560127 MTHFD1LQ6UB35 978 aa14.69□□□□□ -0.06
RABGGTA-213ENST00000560127 FAM43BQ6ZT52 329 aaPredicted RBP14.69□□□□□ -0.06
RABGGTA-213ENST00000560127 TMC7Q7Z402 723 aa14.69□□□□□ -0.06
RABGGTA-213ENST00000560127 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
RABGGTA-213ENST00000560127 ST3GAL5Q9UNP4 418 aa14.69□□□□□ -0.06
RABGGTA-213ENST00000560127 GINS2Q9Y248 185 aa14.69□□□□□ -0.06
RABGGTA-213ENST00000560127 C2orf71A6NGG8 1288 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 CLASP2O75122 1294 aaKnown RBP14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 AOC1P19801 751 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 MTHFRP42898 656 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 ANGPT1Q15389 498 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 KCNT2Q6UVM3 1135 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 CCDC105Q8IYK2 499 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 MRPL43Q8N983 215 aaKnown RBP14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 TDRD5Q8NAT2 981 aaKnown RBP14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 FLCNQ8NFG4 579 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 TNPO1Q92973 898 aaKnown RBP14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 CASD1Q96PB1 797 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 AZI2Q9H6S1 392 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 ATP6V0A4Q9HBG4 840 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 JPH1Q9HDC5 661 aaPredicted RBP14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 JADE2Q9NQC1 790 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 RNF19AQ9NV58 838 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 TMEM161AQ9NX61 479 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 CFAP47Q6ZTR5 3102 aa14.68□□□□□ -0.06
RABGGTA-213ENST00000560127 STAT5BP51692 787 aa14.67□□□□□ -0.06
RABGGTA-213ENST00000560127 RARS2Q5T160 578 aaKnown RBP14.67□□□□□ -0.06
RABGGTA-213ENST00000560127 KANK3Q6NY19 840 aa14.67□□□□□ -0.06
RABGGTA-213ENST00000560127 PLPPR4Q7Z2D5 763 aa14.67□□□□□ -0.06
RABGGTA-213ENST00000560127 DGLUCYQ7Z3D6 616 aa14.67□□□□□ -0.06
RABGGTA-213ENST00000560127 KIAA0319LQ8IZA0 1049 aa14.67□□□□□ -0.06
RABGGTA-213ENST00000560127 C12orf76Q8N812 135 aaPredicted RBP14.67□□□□□ -0.06
RABGGTA-213ENST00000560127 FEZF2Q8TBJ5 459 aa14.67□□□□□ -0.06
RABGGTA-213ENST00000560127 LNPKQ9C0E8 428 aa14.67□□□□□ -0.06
RABGGTA-213ENST00000560127 TMEM117Q9H0C3 514 aa14.67□□□□□ -0.06
RABGGTA-213ENST00000560127 ELAC1Q9H777 363 aaKnown RBP14.67□□□□□ -0.06
RABGGTA-213ENST00000560127 DIAPH3Q9NSV4 1193 aa14.67□□□□□ -0.06
RABGGTA-213ENST00000560127 SLC9A2Q9UBY0 812 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms