RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 RARRES1P49788 294 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 AMPD3Q01432 767 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 PPFIA1Q13136 1202 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 GRIK4Q16099 956 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 KANK3Q6NY19 840 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 TAF2Q6P1X5 1199 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 SLC39A5Q6ZMH5 540 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 USP49Q70CQ1 688 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 RPAINQ86UA6 219 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 ELOA2Q8IYF1 753 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-215ENST00000559774 SYT2Q8N9I0 419 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-215ENST00000559774 RETREG2Q8NC44 543 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 RASSF8Q8NHQ8 419 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 PAWRQ96IZ0 340 aaKnown RBP9.69□□□□□ -0.86
LRRC28-215ENST00000559774 CEP170P1Q96L14 293 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 CCDC43Q96MW1 224 aaKnown RBP9.69□□□□□ -0.86
LRRC28-215ENST00000559774 PNMA5Q96PV4 448 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 SENP6Q9GZR1 1112 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-215ENST00000559774 GDPD2Q9HCC8 539 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 CYP26B1Q9NR63 512 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 HDAC6Q9UBN7 1215 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 KCNG1Q9UIX4 513 aa9.69□□□□□ -0.86
LRRC28-215ENST00000559774 IGKV6-21A0A0C4DH24 114 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 SMIM35A0A1B0GVV1 85 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 ARHGEF35A5YM69 484 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 ZBTB42B2RXF5 422 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 TLR3O15455 904 aaKnown RBP9.68□□□□□ -0.86
LRRC28-215ENST00000559774 MAFO75444 373 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-215ENST00000559774 SLFN14P0C7P3 912 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 PLCG1P19174 1290 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 EN2P19622 333 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-215ENST00000559774 MARK3P27448 753 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 TMOD1P28289 359 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 STAT6P42226 847 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 DNM2P50570 870 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 FAM160A1Q05DH4 1040 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 TBC1D8BQ0IIM8 1120 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 KARSQ15046 597 aaKnown RBP9.68□□□□□ -0.86
LRRC28-215ENST00000559774 E2F4Q16254 413 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 ECM1Q16610 540 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 XKR9Q5GH70 373 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 SPECC1Q5M775 1068 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 CNNM4Q6P4Q7 775 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 POTEGQ6S5H5 508 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 NME8Q8N427 588 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 MCPH1Q8NEM0 835 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 SLC7A3Q8WY07 619 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 LARP4BQ92615 738 aaKnown RBP9.68□□□□□ -0.86
LRRC28-215ENST00000559774 RAD54LQ92698 747 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 CHAMP1Q96JM3 812 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 TIGD1Q96MW7 591 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 CEP89Q96ST8 783 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 TNMDQ9H2S6 317 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 DHX33Q9H6R0 707 aaKnown RBP9.68□□□□□ -0.86
LRRC28-215ENST00000559774 PDLIM7Q9NR12 457 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 SEPT9Q9UHD8 586 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-215ENST00000559774 PCDHA2Q9Y5H9 948 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 MYH15Q9Y2K3 1946 aa9.68□□□□□ -0.86
LRRC28-215ENST00000559774 BRCA2P51587 3418 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 CCDC85CA6NKD9 419 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 DCDC2CA8MYV0 355 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 POLR2DO15514 142 aaKnown RBP9.67□□□□□ -0.86
LRRC28-215ENST00000559774 PRPF40AO75400 957 aaKnown RBP9.67□□□□□ -0.86
LRRC28-215ENST00000559774 C22orf31O95567 290 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 CD4P01730 458 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 PLA2G4BP0C869 781 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 PFKFB1P16118 471 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 CYP11B2P19099 503 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 SCP2P22307 547 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 GUCY2CP25092 1073 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 KLRC1P26715 233 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 SYKP43405 635 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 SLC12A3P55017 1021 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 PSMC6P62333 389 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 RBL2Q08999 1139 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 PTK7Q13308 1070 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 NAALADL2Q58DX5 795 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 MARCH8Q5T0T0 291 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 MTHFD1LQ6UB35 978 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 SV2BQ7L1I2 683 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 RSPH3Q86UC2 560 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 SERINC5Q86VE9 423 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 FSIP1Q8NA03 581 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 ENGASEQ8NFI3 743 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 PIGOQ8TEQ8 1089 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 DIS3LQ8TF46 1054 aaKnown RBP9.67□□□□□ -0.86
LRRC28-215ENST00000559774 LMBR1Q8WVP7 490 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 TCP11Q8WWU5 503 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 HTATIP2Q9BUP3 242 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 BHMT2Q9H2M3 363 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 C17orf75Q9HAS0 396 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 BMP2KQ9NSY1 1161 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-215ENST00000559774 BLOC1S4Q9NUP1 217 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 SETD4Q9NVD3 440 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 KBTBD4Q9NVX7 518 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 TUBE1Q9UJT0 475 aa9.67□□□□□ -0.86
LRRC28-215ENST00000559774 SCN10AQ9Y5Y9 1956 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 A0A1B0GVL5 298 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 E9PMD0 336 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 ZBTB39O15060 712 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms