RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 HSP90AA2PQ14568 343 aaPredicted RBP17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 TRIM50Q86XT4 487 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 BANK1Q8NDB2 785 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 ZNF333Q96JL9 665 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 AK8Q96MA6 479 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 PAK6Q9NQU5 681 aaPredicted RBP17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 DNAH12Q6ZR08 3092 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 SYNRGQ9UMZ2 1314 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 WDR81Q562E7 1941 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 ZNF862O60290 1169 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 ADAMTS4O75173 837 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 MMP3P08254 477 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 SUPT20HL2P0C7V6 817 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 RARBP10826 455 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 CCL5P13501 91 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 ATP4AP20648 1035 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 GRB10Q13322 594 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 KARSQ15046 597 aaKnown RBP17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 PDXDC2PQ6P474 469 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 KCNK18Q7Z418 384 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 CABP7Q86V35 215 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 SMAP1Q8IYB5 467 aaPredicted RBP17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 ARMC5Q96C12 935 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 CCSER1Q9C0I3 900 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 UPF3AQ9H1J1 476 aaKnown RBP17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 TMX1Q9H3N1 280 aa17.62■□□□□ 0.41
CDC42BPB-204ENST00000559043 CTIFO43310 598 aaKnown RBP17.61■□□□□ 0.41
CDC42BPB-204ENST00000559043 HOXD8P13378 290 aaPredicted RBP17.61■□□□□ 0.41
CDC42BPB-204ENST00000559043 SFNP31947 248 aa17.61■□□□□ 0.41
CDC42BPB-204ENST00000559043 JAK3P52333 1124 aa17.61■□□□□ 0.41
CDC42BPB-204ENST00000559043 PSMC6P62333 389 aa17.61■□□□□ 0.41
CDC42BPB-204ENST00000559043 NKX3-2P78367 333 aa17.61■□□□□ 0.41
CDC42BPB-204ENST00000559043 RBM10P98175 930 aaKnown RBP17.61■□□□□ 0.41
CDC42BPB-204ENST00000559043 CUL4BQ13620 913 aa17.61■□□□□ 0.41
CDC42BPB-204ENST00000559043 E4F1Q66K89 784 aaPredicted RBP17.61■□□□□ 0.41
CDC42BPB-204ENST00000559043 SNX29Q8TEQ0 813 aa17.61■□□□□ 0.41
CDC42BPB-204ENST00000559043 RAB34Q9BZG1 259 aa17.61■□□□□ 0.41
CDC42BPB-204ENST00000559043 MCOLN1Q9GZU1 580 aa17.61■□□□□ 0.41
CDC42BPB-204ENST00000559043 XPNPEP3Q9NQH7 507 aa17.61■□□□□ 0.41
CDC42BPB-204ENST00000559043 POTEB3A0JP26 581 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 NOP56O00567 594 aaKnown RBP17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 NRDCO43847 1150 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 PPFIA4O75335 1185 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 STBD1O95210 358 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 C6orf222P0C671 652 aaPredicted RBP17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 RPA1P27694 616 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 CCT6AP40227 531 aaKnown RBP17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 UBA7P41226 1012 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 PTPN14Q15678 1187 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 UTP14CQ5TAP6 766 aaKnown RBP17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 CEP135Q66GS9 1140 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 POTEBQ6S5H4 581 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 TPH2Q8IWU9 490 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 CCDC112Q8NEF3 446 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 MAP7D2Q96T17 732 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 C16orf70Q9BSU1 422 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 AP5M1Q9H0R1 490 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 RNF208Q9H0X6 261 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 PDCL3Q9H2J4 239 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 GABBR1Q9UBS5 961 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 LGR5O75473 907 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 PSAPP07602 524 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 TBX2Q13207 712 aaPredicted RBP17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 FSCN1Q16658 493 aaKnown RBP17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 KRT79Q5XKE5 535 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 CCSAPQ6IQ19 270 aaPredicted RBP17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 POTEGQ6S5H5 508 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 MTERF4Q7Z6M4 381 aaKnown RBP17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 KLHDC9Q8NEP7 349 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 RDM1Q8NG50 284 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 DEFB118Q96PH6 123 aa17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 POLR3CQ9BUI4 534 aaPredicted RBP17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 MAFBQ9Y5Q3 323 aaPredicted RBP17.6■□□□□ 0.41
CDC42BPB-204ENST00000559043 TMEM150BA6NC51 233 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 PPP1R3GB7ZBB8 358 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 P4HBP07237 508 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 ZNF286BP0CG31 522 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 CD44P16070 742 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 CASP1P29466 404 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 NAALADL2Q58DX5 795 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 GNASQ5JWF2 1037 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 HYIQ5T013 277 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 SPATA1Q5VX52 437 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 MIS18BP1Q6P0N0 1132 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 TRMT1LQ7Z2T5 733 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 MTRQ99707 1265 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 LXNQ9BS40 222 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 KIAA1024Q9UPX6 916 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 GTPBP6O43824 516 aaPredicted RBP17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 LGALS2P05162 132 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 PLCG1P19174 1290 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 QARSP47897 775 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 PPP1R13LQ8WUF5 828 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 KAT2BQ92831 832 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 TUFT1Q9NNX1 390 aa17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 SAMSN1Q9NSI8 373 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 TRMT1Q9NXH9 659 aaKnown RBP17.59■□□□□ 0.41
CDC42BPB-204ENST00000559043 KIF2AO00139 706 aaPredicted RBP17.58■□□□□ 0.4
CDC42BPB-204ENST00000559043 BACH1O14867 736 aa17.58■□□□□ 0.4
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