RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 COL1A2P08123 1366 aa6.31□□□□□ -1.4
SMAD3-209ENST00000558894 ADGRA3Q8IWK6 1321 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 CYP3A7-CYP3A51PA0A087WV96 503 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 CCDC196A0A1B0GTZ2 297 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 ZNF862O60290 1169 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 DTNBO60941 627 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 GPR32O75388 356 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 CYP3A7P24462 503 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 BMPR1AP36894 532 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 GATMP50440 423 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 GPM6BQ13491 265 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 UGCGQ16739 394 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 TMEM266Q2M3C6 531 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 CTC1Q2NKJ3 1217 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 LEXMQ3ZCV2 418 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 ZNF484Q5JVG2 852 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 IER5Q5VY09 327 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 ZNF746Q6NUN9 644 aaPredicted RBP6.3□□□□□ -1.4
SMAD3-209ENST00000558894 NME8Q8N427 588 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 BBXQ8WY36 941 aaPredicted RBP6.3□□□□□ -1.4
SMAD3-209ENST00000558894 ZNF274Q96GC6 653 aaPredicted RBP6.3□□□□□ -1.4
SMAD3-209ENST00000558894 YME1L1Q96TA2 773 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 LARP6Q9BRS8 491 aaKnown RBP6.3□□□□□ -1.4
SMAD3-209ENST00000558894 ZNF577Q9BSK1 485 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 SLC26A6Q9BXS9 759 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 TSPYL2Q9H2G4 693 aaPredicted RBP6.3□□□□□ -1.4
SMAD3-209ENST00000558894 AZI2Q9H6S1 392 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 UBE2ZQ9H832 354 aaPredicted RBP6.3□□□□□ -1.4
SMAD3-209ENST00000558894 ERVK-5Q9HDB9 667 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 ZNF302Q9NR11 478 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 SH3GLB2Q9NR46 395 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 TBC1D22BQ9NU19 505 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 TRPC6Q9Y210 931 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 NOC2LQ9Y3T9 749 aaKnown RBP6.3□□□□□ -1.4
SMAD3-209ENST00000558894 MRPL42Q9Y6G3 142 aaKnown RBP6.3□□□□□ -1.4
SMAD3-209ENST00000558894 CHD8Q9HCK8 2581 aa6.3□□□□□ -1.4
SMAD3-209ENST00000558894 GRXCR2A6NFK2 248 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 C9IYK1 514 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 HBP1O60381 514 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 PSMD10O75832 226 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 REC8O95072 547 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 CTDNEP1O95476 244 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 RPLP2P05387 115 aaKnown RBP6.29□□□□□ -1.4
SMAD3-209ENST00000558894 RB1P06400 928 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 IL9P15248 144 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 PSMA5P28066 241 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 GNA11P29992 359 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 ZNF76P36508 570 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 USP11P51784 963 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 FAM189BP81408 668 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 SETQ01105 290 aaPredicted RBP6.29□□□□□ -1.4
SMAD3-209ENST00000558894 KRT76Q01546 638 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 DLX2Q07687 328 aaPredicted RBP6.29□□□□□ -1.4
SMAD3-209ENST00000558894 SCRN1Q12765 414 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 DSC3Q14574 896 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 SKIV2LQ15477 1246 aaKnown RBP6.29□□□□□ -1.4
SMAD3-209ENST00000558894 TARBP2Q15633 366 aaKnown RBP6.29□□□□□ -1.4
SMAD3-209ENST00000558894 AAK1Q2M2I8 961 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 Q4G0T1 1027 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 PRR16Q569H4 304 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 TCEAL5Q5H9L2 206 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 MCTP2Q6DN12 878 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 MIS18BP1Q6P0N0 1132 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 RSPH3Q86UC2 560 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 FAM228AQ86W67 206 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 FAM178BQ8IXR5 827 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 SMAP1Q8IYB5 467 aaPredicted RBP6.29□□□□□ -1.4
SMAD3-209ENST00000558894 CMTR2Q8IYT2 770 aaKnown RBP6.29□□□□□ -1.4
SMAD3-209ENST00000558894 FIBCD1Q8N539 461 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 DAGLBQ8NCG7 672 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 BANK1Q8NDB2 785 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 ETNPPLQ8TBG4 499 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 TBCKQ8TEA7 893 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 RIT2Q99578 217 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 FTHL17Q9BXU8 183 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 UPF3BQ9BZI7 483 aaKnown RBP6.29□□□□□ -1.4
SMAD3-209ENST00000558894 ADAMTS10Q9H324 1103 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 EPHX3Q9H6B9 360 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 RGS18Q9NS28 235 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 GJB4Q9NTQ9 266 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 RNF19AQ9NV58 838 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 GABBR1Q9UBS5 961 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 PCDHA4Q9UN74 947 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 PLAGL2Q9UPG8 496 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 PCDHA10Q9Y5I2 948 aa6.29□□□□□ -1.4
SMAD3-209ENST00000558894 IGKV6-21A0A0C4DH24 114 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 TMEM150BA6NC51 233 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 BACH1O14867 736 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 LINC01565O15544 149 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 DEXIO95424 95 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 TDP2O95551 362 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 MMP1P03956 469 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 ITGB1P05556 798 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 FDPSP14324 419 aaKnown RBP6.28□□□□□ -1.4
SMAD3-209ENST00000558894 KCNA5P22460 613 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 CTNNB1P35222 781 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 GTF2F1P35269 517 aaKnown RBP eCLIP6.28□□□□□ -1.41e-7■■■□□ 15.5
SMAD3-209ENST00000558894 IRS1P35568 1242 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 CRYBB1P53674 252 aaPredicted RBP6.28□□□□□ -1.4
SMAD3-209ENST00000558894 FGD1P98174 961 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms