RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 CEP128Q6ZU80 1094 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 PI4K2BQ8TCG2 481 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 MFSD3Q96ES6 412 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 SCLYQ96I15 445 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 TEX13AQ9BXU3 409 aaPredicted RBP7.63□□□□□ -1.19
LRRC28-209ENST00000558861 MBNL3Q9NUK0 354 aaKnown RBP7.63□□□□□ -1.19
LRRC28-209ENST00000558861 C19orf73Q9NVV2 129 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 TNFRSF10DQ9UBN6 386 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 CASZ1Q86V15 1759 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 QSER1Q2KHR3 1735 aa7.63□□□□□ -1.19
LRRC28-209ENST00000558861 HYAL3O43820 417 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-209ENST00000558861 EFCAB14O75071 495 aa7.62□□□□□ -1.19
LRRC28-209ENST00000558861 CRTAMO95727 393 aa7.62□□□□□ -1.19
LRRC28-209ENST00000558861 STARD3NLO95772 234 aa7.62□□□□□ -1.19
LRRC28-209ENST00000558861 EFEMP2O95967 443 aa7.62□□□□□ -1.19
LRRC28-209ENST00000558861 ERVFC1P60507 584 aa7.62□□□□□ -1.19
LRRC28-209ENST00000558861 R3HDM1Q15032 1099 aaKnown RBP7.62□□□□□ -1.19
LRRC28-209ENST00000558861 TM4SF20Q53R12 229 aa7.62□□□□□ -1.19
LRRC28-209ENST00000558861 TAF7LQ5H9L4 462 aa7.62□□□□□ -1.19
LRRC28-209ENST00000558861 HLA-DQA1Q5Y7H0 255 aa7.62□□□□□ -1.19
LRRC28-209ENST00000558861 IQCEQ6IPM2 695 aa7.62□□□□□ -1.19
LRRC28-209ENST00000558861 RSPO2Q6UXX9 243 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-209ENST00000558861 COL23A1Q86Y22 540 aaPredicted RBP7.62□□□□□ -1.19
LRRC28-209ENST00000558861 JAMLQ86YT9 394 aa7.62□□□□□ -1.19
LRRC28-209ENST00000558861 LAS1LQ9Y4W2 734 aaKnown RBP7.62□□□□□ -1.19
LRRC28-209ENST00000558861 PCDHA9Q9Y5H5 950 aa7.62□□□□□ -1.19
LRRC28-209ENST00000558861 PCDHA2Q9Y5H9 948 aa7.62□□□□□ -1.19
LRRC28-209ENST00000558861 LAMB4A4D0S4 1761 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 NOTOA8MTQ0 251 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 RNASE1P07998 156 aaKnown RBP7.61□□□□□ -1.19
LRRC28-209ENST00000558861 IL6STP40189 918 aaPredicted RBP7.61□□□□□ -1.19
LRRC28-209ENST00000558861 KIR2DL1P43626 348 aaPredicted RBP7.61□□□□□ -1.19
LRRC28-209ENST00000558861 KIR2DL2P43627 348 aaPredicted RBP7.61□□□□□ -1.19
LRRC28-209ENST00000558861 PIP4K2AP48426 406 aaPredicted RBP7.61□□□□□ -1.19
LRRC28-209ENST00000558861 RTP1P59025 263 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 GPR85P60893 370 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 EXOSC9Q06265 439 aaKnown RBP7.61□□□□□ -1.19
LRRC28-209ENST00000558861 MTDHQ86UE4 582 aaKnown RBP7.61□□□□□ -1.19
LRRC28-209ENST00000558861 IFNL3Q8IZI9 196 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 ANKS4BQ8N8V4 417 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 AGBL5Q8NDL9 886 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 DPF3Q92784 378 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 ZFYVE21Q9BQ24 234 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 MYH16Q9H6N6 1097 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 STK32BQ9NY57 414 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 GULP1Q9UBP9 304 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 PCDHA8Q9Y5H6 950 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 COL24A1Q17RW2 1714 aa7.61□□□□□ -1.19
LRRC28-209ENST00000558861 COL15A1P39059 1388 aa7.6□□□□□ -1.19
LRRC28-209ENST00000558861 USP42Q9H9J4 1324 aaKnown RBP7.6□□□□□ -1.19
LRRC28-209ENST00000558861 SCO2A0A1W2PP80 73 aa7.6□□□□□ -1.19
LRRC28-209ENST00000558861 AQP7O14520 342 aa7.6□□□□□ -1.19
LRRC28-209ENST00000558861 HMGB2P26583 209 aaKnown RBP7.6□□□□□ -1.19
LRRC28-209ENST00000558861 MASP1P48740 699 aa7.6□□□□□ -1.19
LRRC28-209ENST00000558861 GUCY1A3Q02108 690 aa7.6□□□□□ -1.19
LRRC28-209ENST00000558861 ZNF460Q14592 562 aa7.6□□□□□ -1.19
LRRC28-209ENST00000558861 KIR3DS1Q14943 382 aa7.6□□□□□ -1.19
LRRC28-209ENST00000558861 ZNF792Q3KQV3 632 aa7.6□□□□□ -1.19
LRRC28-209ENST00000558861 HSF5Q4G112 596 aaPredicted RBP7.6□□□□□ -1.19
LRRC28-209ENST00000558861 TIGD5Q53EQ6 642 aa7.6□□□□□ -1.19
LRRC28-209ENST00000558861 LBX2Q6XYB7 198 aa7.6□□□□□ -1.19
LRRC28-209ENST00000558861 FILIP1Q7Z7B0 1213 aa7.6□□□□□ -1.19
LRRC28-209ENST00000558861 PDZD8Q8NEN9 1154 aa7.6□□□□□ -1.19
LRRC28-209ENST00000558861 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.6□□□□□ -1.19
LRRC28-209ENST00000558861 IMPACTQ9P2X3 320 aa7.6□□□□□ -1.19
LRRC28-209ENST00000558861 PPARGC1AQ9UBK2 798 aaKnown RBP7.6□□□□□ -1.19
LRRC28-209ENST00000558861 TNPO3Q9Y5L0 923 aaKnown RBP7.6□□□□□ -1.19
LRRC28-209ENST00000558861 C4AP0C0L4 1744 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 A0A1W2PQ45 241 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-209ENST00000558861 A0A1W2PQY0 241 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 TCRBV16S1A1N1A0A5B0 115 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 ELL2O00472 640 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-209ENST00000558861 NPHS1O60500 1241 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 CAMTA2O94983 1202 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 ANXA1P04083 346 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 MYCLP1P12525 358 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-209ENST00000558861 GYS1P13807 737 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 TRHRP34981 398 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-209ENST00000558861 BCL6P41182 706 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 TWISTNBQ3B726 338 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-209ENST00000558861 RNF187Q5TA31 235 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-209ENST00000558861 NLRP10Q86W26 655 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 ABI1Q8IZP0 508 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 MAGEB10Q96LZ2 347 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-209ENST00000558861 PLCD4Q9BRC7 762 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 SP110Q9HB58 689 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 DDX21Q9NR30 783 aaKnown RBP eCLIP7.59□□□□□ -1.19
LRRC28-209ENST00000558861 TFCP2L1Q9NZI6 479 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 CHPF2Q9P2E5 772 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 MAGEC2Q9UBF1 373 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-209ENST00000558861 FBLN5Q9UBX5 448 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 SRP68Q9UHB9 627 aaKnown RBP7.59□□□□□ -1.19
LRRC28-209ENST00000558861 PRKAB1Q9Y478 270 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 TIMM13Q9Y5L4 95 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-209ENST00000558861 TAF6LQ9Y6J9 622 aa7.59□□□□□ -1.19
LRRC28-209ENST00000558861 A0A087X0B3 334 aa7.58□□□□□ -1.2
LRRC28-209ENST00000558861 MYO1BO43795 1136 aa7.58□□□□□ -1.2
LRRC28-209ENST00000558861 PPP1R11O60927 126 aaPredicted RBP7.58□□□□□ -1.2
LRRC28-209ENST00000558861 DNAJC6O75061 913 aa7.58□□□□□ -1.2
LRRC28-209ENST00000558861 MSL3P1P0C860 447 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms