RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 WDR5P61964 334 aaKnown RBP11.3□□□□□ -0.6
SPG11-212ENST00000558790 DEFB103AP81534 67 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 PTGISQ16647 500 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 GDF6Q6KF10 455 aaPredicted RBP11.3□□□□□ -0.6
SPG11-212ENST00000558790 TBC1D10CQ8IV04 446 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 AFG1LQ8WV93 481 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 DHX38Q92620 1227 aaKnown RBP11.3□□□□□ -0.6
SPG11-212ENST00000558790 EVI5LQ96CN4 794 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 HELLSQ9NRZ9 838 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 COG5Q9UP83 839 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 NEDD4P46934 1319 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 CACNA1HO95180 2353 aa11.3□□□□□ -0.6
SPG11-212ENST00000558790 CHD6Q8TD26 2715 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 KMT2EQ8IZD2 1858 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 LOXHD1Q8IVV2 1947 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 BRD1O95696 1058 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 GOLGA8HP0CJ92 632 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 HSPD1P10809 573 aaKnown RBP11.29□□□□□ -0.6
SPG11-212ENST00000558790 PTSQ03393 145 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 ARHGAP1Q07960 439 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 NAA30Q147X3 362 aaPredicted RBP11.29□□□□□ -0.6
SPG11-212ENST00000558790 GPNMBQ14956 572 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 TCTN1Q2MV58 587 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 B4GALNT3Q6L9W6 998 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 CCDC62Q6P9F0 684 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 HFE2Q6ZVN8 426 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 LRRC8DQ7L1W4 858 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 SESTD1Q86VW0 696 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 CCDC155Q8N6L0 562 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 CAGE1Q8TC20 777 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 AFAP1L1Q8TED9 768 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 KAT2BQ92831 832 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 GPAMQ9HCL2 828 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 COL20A1Q9P218 1284 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 PNMA2Q9UL42 364 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 KIAA1671Q9BY89 1806 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 CCDC171Q6TFL3 1326 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 ZNF292O60281 2723 aa11.29□□□□□ -0.6
SPG11-212ENST00000558790 KIF28PB7ZC32 967 aa11.28□□□□□ -0.6
SPG11-212ENST00000558790 RBL2Q08999 1139 aa11.28□□□□□ -0.6
SPG11-212ENST00000558790 NMIQ13287 307 aaPredicted RBP11.28□□□□□ -0.6
SPG11-212ENST00000558790 CDC37Q16543 378 aaPredicted RBP11.28□□□□□ -0.6
SPG11-212ENST00000558790 LY6KQ17RY6 165 aa11.28□□□□□ -0.6
SPG11-212ENST00000558790 MCMDC2Q4G0Z9 681 aa11.28□□□□□ -0.6
SPG11-212ENST00000558790 SEPT14Q6ZU15 432 aa11.28□□□□□ -0.6
SPG11-212ENST00000558790 FAM178BQ8IXR5 827 aa11.28□□□□□ -0.6
SPG11-212ENST00000558790 GJD3Q8N144 294 aa11.28□□□□□ -0.6
SPG11-212ENST00000558790 STAG2Q8N3U4 1231 aa11.28□□□□□ -0.6
SPG11-212ENST00000558790 ZKSCAN3Q9BRR0 538 aa11.28□□□□□ -0.6
SPG11-212ENST00000558790 PHACTR1Q9C0D0 580 aa11.28□□□□□ -0.6
SPG11-212ENST00000558790 B4DLN1 442 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 NBNO60934 754 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 GH1P01241 217 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 CXCL10P02778 98 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 ZNF286BP0CG31 522 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 SELPP16109 830 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 MRPL12P52815 198 aaKnown RBP11.27□□□□□ -0.61
SPG11-212ENST00000558790 PDE1AP54750 535 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 WDR44Q5JSH3 913 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 GPATCH4Q5T3I0 446 aaKnown RBP11.27□□□□□ -0.61
SPG11-212ENST00000558790 CNKSR3Q6P9H4 555 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 MFSD6Q6ZSS7 791 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 CHST3Q7LGC8 479 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 ALDH16A1Q8IZ83 802 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 C1orf216Q8TAB5 229 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 SYTL5Q8TDW5 730 aaPredicted RBP11.27□□□□□ -0.61
SPG11-212ENST00000558790 TBC1D5Q92609 795 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 UBA5Q9GZZ9 404 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 KCNH6Q9H252 994 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 FAM86C1Q9NVL1 165 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 GTF2IRD1Q9UHL9 959 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 MTUS1Q9ULD2 1270 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 ABCB11O95342 1321 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 COL4A6Q14031 1691 aa11.27□□□□□ -0.61
SPG11-212ENST00000558790 FAM186AA6NE01 2351 aa11.26□□□□□ -0.61
SPG11-212ENST00000558790 GJB5O95377 273 aa11.26□□□□□ -0.61
SPG11-212ENST00000558790 F2P00734 622 aa11.26□□□□□ -0.61
SPG11-212ENST00000558790 PCP11498 1178 aaKnown RBP11.26□□□□□ -0.61
SPG11-212ENST00000558790 CKBP12277 381 aa11.26□□□□□ -0.61
SPG11-212ENST00000558790 IL9P15248 144 aa11.26□□□□□ -0.61
SPG11-212ENST00000558790 ATP4AP20648 1035 aa11.26□□□□□ -0.61
SPG11-212ENST00000558790 MSX1P28360 303 aa11.26□□□□□ -0.61
SPG11-212ENST00000558790 ANKRD45Q5TZF3 282 aa11.26□□□□□ -0.61
SPG11-212ENST00000558790 RGS22Q8NE09 1264 aa11.26□□□□□ -0.61
SPG11-212ENST00000558790 WNT8BQ93098 351 aa11.26□□□□□ -0.61
SPG11-212ENST00000558790 TTC14Q96N46 770 aa11.26□□□□□ -0.61
SPG11-212ENST00000558790 TAAR1Q96RJ0 339 aa11.26□□□□□ -0.61
SPG11-212ENST00000558790 HDAC6Q9UBN7 1215 aa11.26□□□□□ -0.61
SPG11-212ENST00000558790 LINC01553A4QN01 128 aa11.25□□□□□ -0.61
SPG11-212ENST00000558790 EIF2AK2P19525 551 aaKnown RBP11.25□□□□□ -0.61
SPG11-212ENST00000558790 MBTPS1Q14703 1052 aa11.25□□□□□ -0.61
SPG11-212ENST00000558790 DGKDQ16760 1214 aa11.25□□□□□ -0.61
SPG11-212ENST00000558790 TRIM71Q2Q1W2 868 aaKnown RBP11.25□□□□□ -0.61
SPG11-212ENST00000558790 QRICH1Q2TAL8 776 aa11.25□□□□□ -0.61
SPG11-212ENST00000558790 ADGRF4Q8IZF3 695 aa11.25□□□□□ -0.61
SPG11-212ENST00000558790 NSUN6Q8TEA1 469 aaKnown RBP11.25□□□□□ -0.61
SPG11-212ENST00000558790 ESR2Q92731 530 aa11.25□□□□□ -0.61
SPG11-212ENST00000558790 RMDN3Q96TC7 470 aa11.25□□□□□ -0.61
SPG11-212ENST00000558790 ALG1Q9BT22 464 aa11.25□□□□□ -0.61
SPG11-212ENST00000558790 SAP130Q9H0E3 1048 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms