RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 GRIK4Q16099 956 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 CCDC178Q5BJE1 867 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 SPOUT1Q5T280 376 aaKnown RBP7.81□□□□□ -1.16
LRRC28-207ENST00000558500 PLPP4Q5VZY2 271 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 FCHSD1Q86WN1 690 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 HOMEZQ8IX15 550 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 PLPP6Q8IY26 295 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 THNSL1Q8IYQ7 743 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 ZDHHC14Q8IZN3 488 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 DTWD2Q8NBA8 298 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 COLGALT1Q8NBJ5 622 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 MTMR8Q96EF0 704 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 TCF25Q9BQ70 676 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 FAM49AQ9H0Q0 323 aaPredicted RBP7.81□□□□□ -1.16
LRRC28-207ENST00000558500 ADAM7Q9H2U9 754 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 TMX1Q9H3N1 280 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 SEMA4AQ9H3S1 761 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 RNF41Q9H4P4 317 aaPredicted RBP7.81□□□□□ -1.16
LRRC28-207ENST00000558500 NGRNQ9NPE2 291 aaKnown RBP7.81□□□□□ -1.16
LRRC28-207ENST00000558500 DLL3Q9NYJ7 618 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 RTEL1Q9NZ71 1219 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 LRFN2Q9ULH4 789 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 LZTS1Q9Y250 596 aa7.81□□□□□ -1.16
LRRC28-207ENST00000558500 TBKBP1A7MCY6 615 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 HIDE1A8MVS5 230 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 IBSPP21815 317 aaPredicted RBP7.8□□□□□ -1.16
LRRC28-207ENST00000558500 MARK3P27448 753 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 TCF7P36402 384 aaPredicted RBP7.8□□□□□ -1.16
LRRC28-207ENST00000558500 MTHFRP42898 656 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 NT5C2P49902 561 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 PLCB3Q01970 1234 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 IER5Q5VY09 327 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 CES5AQ6NT32 575 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 IQCA1Q86XH1 822 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 STAG2Q8N3U4 1231 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 TDRD5Q8NAT2 981 aaKnown RBP7.8□□□□□ -1.16
LRRC28-207ENST00000558500 MRPS27Q92552 414 aaKnown RBP7.8□□□□□ -1.16
LRRC28-207ENST00000558500 CASP10Q92851 521 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 ZBTB10Q96DT7 871 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 FAM227BQ96M60 508 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 ZSCAN10Q96SZ4 725 aaPredicted RBP7.8□□□□□ -1.16
LRRC28-207ENST00000558500 SENP7Q9BQF6 1050 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 RTP3Q9BQQ7 232 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 ENTPD7Q9NQZ7 604 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 TYW1Q9NV66 732 aaKnown RBP7.8□□□□□ -1.16
LRRC28-207ENST00000558500 HCSTQ9UBK5 93 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 LIMD1Q9UGP4 676 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 PUF60Q9UHX1 559 aaKnown RBP7.8□□□□□ -1.16
LRRC28-207ENST00000558500 PCDHB7Q9Y5E2 793 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 TRPV2Q9Y5S1 764 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 VPS13AQ96RL7 3174 aa7.8□□□□□ -1.16
LRRC28-207ENST00000558500 GPR179Q6PRD1 2367 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 TTC3P53804 2025 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 FRMPD4Q14CM0 1322 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 IGSF9BQ9UPX0 1349 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 A0A0D9SFI3 127 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 RRN3P2A6NIE6 340 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 KLRF2D3W0D1 207 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 M0QZ92 97 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 LAG3P18627 525 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 MX1P20591 662 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 IGBP1P78318 339 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 TMEM62Q0P6H9 643 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 TRAF1Q13077 416 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 MCMDC2Q4G0Z9 681 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 FAM102BQ5T8I3 360 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 FAM43BQ6ZT52 329 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-207ENST00000558500 ZNF589Q86UQ0 364 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-207ENST00000558500 ENAHQ8N8S7 591 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-207ENST00000558500 GIMAP8Q8ND71 665 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-207ENST00000558500 CYP2W1Q8TAV3 490 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 SEPT1Q8WYJ6 367 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 EVI5LQ96CN4 794 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 CELF4Q9BZC1 486 aaKnown RBP7.79□□□□□ -1.16
LRRC28-207ENST00000558500 CWH43Q9H720 699 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 ERAP1Q9NZ08 941 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 USTQ9Y2C2 406 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 HCFC2Q9Y5Z7 792 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 R4GN57 208 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 SPTBN2O15020 2390 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 OTOGLQ3ZCN5 2332 aa7.79□□□□□ -1.16
LRRC28-207ENST00000558500 KDM3AQ9Y4C1 1321 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 KIAA1217Q5T5P2 1943 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 GSTTP1A0A1W2PQM5 241 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 POTEMA6NI47 508 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 TRIM66O15016 1216 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 MGEA5O60502 916 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 WEE2P0C1S8 567 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 INSRRP14616 1297 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 HOXB1P14653 301 aaPredicted RBP7.78□□□□□ -1.16
LRRC28-207ENST00000558500 HNRNPUQ00839 825 aaKnown RBP eCLIP7.78□□□□□ -1.16
LRRC28-207ENST00000558500 TMEM266Q2M3C6 531 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 SLC35G1Q2M3R5 365 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 KIAA1841Q6NSI8 718 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 XRRA1Q6P2D8 792 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 POTEGQ6S5H5 508 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 SLC24A5Q71RS6 500 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 TMC7Q7Z402 723 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 NLRX1Q86UT6 975 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 HOMER1Q86YM7 354 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms