RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 DIS3L2Q8IYB7 885 aaKnown RBP11.57□□□□□ -0.56
TPM1-212ENST00000558347 REXO1Q8N1G1 1221 aaKnown RBP11.57□□□□□ -0.56
TPM1-212ENST00000558347 CCDC148Q8NFR7 591 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 PHOSPHO2Q8TCD6 241 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 CCDC12Q8WUD4 166 aaPredicted RBP11.57□□□□□ -0.56
TPM1-212ENST00000558347 GLG1Q92896 1179 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 UIMC1Q96RL1 719 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 ERAP1Q9NZ08 941 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 SIP14410 1827 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 KAT6AQ92794 2004 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 EMSYQ7Z589 1322 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 NRCAMQ92823 1304 aa11.57□□□□□ -0.56
TPM1-212ENST00000558347 KIF28PB7ZC32 967 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 LGR5O75473 907 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 ARHGEF15O94989 841 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 CCNE2O96020 404 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 CA3P07451 260 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 GNAT1P11488 350 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 GNA11P29992 359 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 CDC25BP30305 580 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 KCNJ6P48051 423 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 ACTR2P61160 394 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 PPFIA1Q13136 1202 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 ADGRE1Q14246 886 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 PPP2R2DQ66LE6 453 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 FAM173BQ6P4H8 233 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 RUFY4Q6ZNE9 571 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 NIPA1Q7RTP0 329 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 PLA2G4DQ86XP0 818 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 DAGLBQ8NCG7 672 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 DBF4BQ8NFT6 615 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 BICD2Q8TD16 824 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 UBE2Q2Q8WVN8 375 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 SDF4Q9BRK5 362 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 SMARCAD1Q9H4L7 1026 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 TFIP11Q9UBB9 837 aaKnown RBP11.56□□□□□ -0.56
TPM1-212ENST00000558347 KCNJ14Q9UNX9 436 aa11.56□□□□□ -0.56
TPM1-212ENST00000558347 MICAL3Q7RTP6 2002 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 DDX39AO00148 427 aaKnown RBP11.55□□□□□ -0.56
TPM1-212ENST00000558347 DHX15O43143 795 aaKnown RBP11.55□□□□□ -0.56
TPM1-212ENST00000558347 EDIL3O43854 480 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 CAND2O75155 1236 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 ATG7O95352 703 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 KRT2P35908 639 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 NLRP5P59047 1200 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 MKRN4PQ13434 485 aaPredicted RBP11.55□□□□□ -0.56
TPM1-212ENST00000558347 GRIK4Q16099 956 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 MARCH8Q5T0T0 291 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 NOSTRINQ8IVI9 506 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 USP38Q8NB14 1042 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 MYRIPQ8NFW9 859 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 TNFRSF25Q93038 417 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 ZBTB10Q96DT7 871 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 GAS2L1Q99501 681 aaPredicted RBP11.55□□□□□ -0.56
TPM1-212ENST00000558347 CBX8Q9HC52 389 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 BRMS1Q9HCU9 246 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 XIRP2A4UGR9 3374 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 ABHD14A-ACY1A0A1B0GW23 586 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 LCHNA4D1U4 455 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 MBLAC1A4D2B0 266 aaPredicted RBP11.55□□□□□ -0.56
TPM1-212ENST00000558347 BTBD18B2RXH4 712 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 AP5Z1O43299 807 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 NR1I2O75469 434 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 GTF2F1P35269 517 aaKnown RBP eCLIP11.55□□□□□ -0.56
TPM1-212ENST00000558347 IGBP1P78318 339 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 IKBKEQ14164 716 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 PLCB4Q15147 1175 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 ANO6Q4KMQ2 910 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 PLEKHG4Q58EX7 1191 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 ABHD15Q6UXT9 468 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
TPM1-212ENST00000558347 SPRED2Q7Z698 418 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.55□□□□□ -0.56
TPM1-212ENST00000558347 KIAA1524Q8TCG1 905 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 AZI2Q9H6S1 392 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 CERS4Q9HA82 394 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 TUBE1Q9UJT0 475 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 PCDHA4Q9UN74 947 aa11.55□□□□□ -0.56
TPM1-212ENST00000558347 MYO9BQ13459 2157 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 IGKV6D-21A0A0A0MT36 114 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 M0R2N6 131 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 IPO5O00410 1097 aaKnown RBP11.54□□□□□ -0.56
TPM1-212ENST00000558347 TLL1O43897 1013 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 CHRNA1P02708 482 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 INSRRP14616 1297 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 CIITAP33076 1130 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 STAT5BP51692 787 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 TAP1Q03518 808 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 MGAT3Q09327 533 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 GNL2Q13823 731 aaKnown RBP11.54□□□□□ -0.56
TPM1-212ENST00000558347 FAM26DQ5JW98 314 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 MCTP2Q6DN12 878 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 SARM1Q6SZW1 724 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 CCDC73Q6ZRK6 1079 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 PLPPR4Q7Z2D5 763 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 RPAINQ86UA6 219 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 CCDC60Q8IWA6 550 aaPredicted RBP11.54□□□□□ -0.56
TPM1-212ENST00000558347 BLIDQ8IZY5 108 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 OXER1Q8TDS5 423 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 TRAPPC12Q8WVT3 735 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms