RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 EFCAB12Q6NXP0 572 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 CNKSR3Q6P9H4 555 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 OTUD6AQ7L8S5 288 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 NEK9Q8TD19 979 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 HERVK_113Q902F9 699 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 SEPT8Q92599 483 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 LRCH3Q96II8 777 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 CEP170P1Q96L14 293 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 EIF2AK1Q9BQI3 630 aaKnown RBP10.06□□□□□ -0.8
SPG11-207ENST00000558138 ZBED2Q9BTP6 218 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 TMEM60Q9H2L4 133 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 ZSWIM4Q9H7M6 989 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 BMP2KQ9NSY1 1161 aaPredicted RBP10.06□□□□□ -0.8
SPG11-207ENST00000558138 RGL1Q9NZL6 768 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 MSRAQ9UJ68 235 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 PCDHB6Q9Y5E3 794 aa10.06□□□□□ -0.8
SPG11-207ENST00000558138 TMEM150BA6NC51 233 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 ZNF862O60290 1169 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 NBNO60934 754 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 BAIAP3O94812 1187 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 C22orf31O95567 290 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 VTNP04004 478 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 ATP2A2P16615 1042 aaKnown RBP10.05□□□□□ -0.8
SPG11-207ENST00000558138 YWHABP31946 246 aaKnown RBP10.05□□□□□ -0.8
SPG11-207ENST00000558138 FXR1P51114 621 aaKnown RBP eCLIP10.05□□□□□ -0.8
SPG11-207ENST00000558138 CLCN3P51790 818 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 ADAM17P78536 824 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 PAK2Q13177 524 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 PTGDRQ13258 359 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 BECN1Q14457 450 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 ZRSR1Q15695 479 aaKnown RBP10.05□□□□□ -0.8
SPG11-207ENST00000558138 MARCH8Q5T0T0 291 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 ZNF697Q5TEC3 545 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 DTHD1Q6ZMT9 781 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 C16orf59Q7L2K0 433 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 BRAPQ7Z569 592 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 NME8Q8N427 588 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 LRRC71Q8N4P6 559 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 RASSF8Q8NHQ8 419 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 NLRP7Q8WX94 980 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 SLC7A3Q8WY07 619 aa10.05□□□□□ -0.8
SPG11-207ENST00000558138 JPH2Q9BR39 696 aaPredicted RBP10.05□□□□□ -0.8
SPG11-207ENST00000558138 IFIH1Q9BYX4 1025 aaKnown RBP10.05□□□□□ -0.8
SPG11-207ENST00000558138 TRIOBPQ9H2D6 2365 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 LAD1O00515 517 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 SOX1O00570 391 aaPredicted RBP10.04□□□□□ -0.8
SPG11-207ENST00000558138 EFCAB14O75071 495 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 CHRNA1P02708 482 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 AMHP03971 560 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 SYT1P21579 422 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 CCT6AP40227 531 aaKnown RBP10.04□□□□□ -0.8
SPG11-207ENST00000558138 NFX1Q12986 1120 aaKnown RBP10.04□□□□□ -0.8
SPG11-207ENST00000558138 RAB30Q15771 203 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 KIZQ2M2Z5 673 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 ODR4Q5SWX8 454 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 FOXD4L5Q5VV16 416 aaPredicted RBP10.04□□□□□ -0.8
SPG11-207ENST00000558138 FAM117BQ6P1L5 589 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 TSHZ1Q6ZSZ6 1077 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 EXOC8Q8IYI6 725 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 MYOCDQ8IZQ8 938 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 DBF4BQ8NFT6 615 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 FOXD4L4Q8WXT5 416 aaPredicted RBP10.04□□□□□ -0.8
SPG11-207ENST00000558138 APBB2Q92870 758 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 CDK5RAP3Q96JB5 506 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 FAM161BQ96MY7 647 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 MTMR9Q96QG7 549 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 SLC9A7Q96T83 725 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 CELF4Q9BZC1 486 aaKnown RBP10.04□□□□□ -0.8
SPG11-207ENST00000558138 CYP26B1Q9NR63 512 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 CXXC1Q9P0U4 656 aaPredicted RBP10.04□□□□□ -0.8
SPG11-207ENST00000558138 LRWD1Q9UFC0 647 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 STK24Q9Y6E0 443 aa10.04□□□□□ -0.8
SPG11-207ENST00000558138 WDR81Q562E7 1941 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 ABHD14A-ACY1A0A1B0GW23 586 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 VWA3AA6NCI4 1184 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 GRXCR1A8MXD5 290 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 STX6O43752 255 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 RPS6KA5O75582 802 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 BMP15O95972 392 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 CXCL10P02778 98 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 CD52P31358 61 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 RFC5P40937 340 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 TOB1P50616 345 aaPredicted RBP10.03□□□□□ -0.8
SPG11-207ENST00000558138 RABGGTBP53611 331 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 NPEPPSP55786 919 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 SMAD3P84022 425 aaKnown RBP10.03□□□□□ -0.8
SPG11-207ENST00000558138 CEBPZQ03701 1054 aaKnown RBP10.03□□□□□ -0.8
SPG11-207ENST00000558138 SPIRE1Q08AE8 756 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 FAM26DQ5JW98 314 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 KRT79Q5XKE5 535 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 B3GNT9Q6UX72 402 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 RPAINQ86UA6 219 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 C4orf19Q8IY42 314 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 SNX29Q8TEQ0 813 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 ZNF668Q96K58 619 aaPredicted RBP10.03□□□□□ -0.8
SPG11-207ENST00000558138 NLRP4Q96MN2 994 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 OSMRQ99650 979 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 MTRQ99707 1265 aa10.03□□□□□ -0.8
SPG11-207ENST00000558138 NIFKQ9BYG3 293 aaKnown RBP10.03□□□□□ -0.8
SPG11-207ENST00000558138 TUFT1Q9NNX1 390 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms