RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 PATL1Q86TB9 770 aaKnown RBP11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 NUP93Q8N1F7 819 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 LINC00469Q8N7U9 141 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 NGDNQ8NEJ9 315 aaKnown RBP11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 SH3TC2Q8TF17 1288 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 TCEANC2Q96MN5 208 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 MED15Q96RN5 788 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 FNBP1Q96RU3 617 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 HAUS4Q9H6D7 363 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 FAM114A2Q9NRY5 505 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 COL3A1P02461 1466 aaPredicted RBP11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 ANO9A1A5B4 782 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 OR6B1O95007 311 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 PTPN2P17706 415 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 MXI1P50539 228 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 ARHGAP24Q8N264 748 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 CCDC51Q96ER9 411 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 FHDC1Q9C0D6 1143 aaPredicted RBP11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 SAMD15Q9P1V8 674 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 NFE2L3Q9Y4A8 694 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 A0A0G2JS52 829 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 NOTOA8MTQ0 251 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 SNX3O60493 162 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 CBFA2T3O75081 653 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 CHRNB1P11230 501 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 CPA3P15088 417 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 SKIV2L2P42285 1042 aaKnown RBP11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 AP3M2P53677 418 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 SYCP2LQ5T4T6 812 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 ANKLE1Q8NAG6 615 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 SUN5Q8TC36 379 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 C8orf48Q96LL4 319 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 RAB3IPQ96QF0 476 aaPredicted RBP11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 NEURL2Q9BR09 285 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 CRNKL1Q9BZJ0 848 aaKnown RBP11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 CLIC5Q9NZA1 410 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 LRRC7Q96NW7 1537 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 ESYT3A0FGR9 886 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 RNF225M0QZC1 329 aaPredicted RBP11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 AFPP02771 609 aaKnown RBP11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 RGS2P41220 211 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 MAGOHP61326 146 aaKnown RBP11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 HERVK_113P62684 666 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 RFPL4BQ6ZWI9 263 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 VPS36Q86VN1 386 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 KBTBD2Q8IY47 623 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 FITM2Q8N6M3 262 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 RETREG2Q8NC44 543 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 KCNG4Q8TDN1 519 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 MAGOHBQ96A72 148 aaKnown RBP11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 VPS50Q96JG6 964 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 RTFDC1Q9BY42 306 aaPredicted RBP11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 ALDH8A1Q9H2A2 487 aaPredicted RBP11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 EPB41L1Q9H4G0 881 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 IL1RAPL1Q9NZN1 696 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 NDUFA13Q9P0J0 144 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 SCHIP1Q9P0W5 487 aaPredicted RBP11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 NOVA2Q9UNW9 492 aaKnown RBP11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 MROH7-TTC4A0A0A0MT08 1334 aa11.9□□□□□ -0.5
SEMA4B-204ENST00000558065 A0A088AWK7 358 aa11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 KCNJ13O60928 360 aa11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 DDX5P17844 614 aaKnown RBP11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 CES1P23141 567 aa11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 ETV3P41162 512 aa11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 TUBA4AP68366 448 aa11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 IDI1Q13907 227 aa11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 SNX30Q5VWJ9 437 aa11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 CNGA4Q8IV77 575 aa11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 EPSTI1Q96J88 318 aa11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 ASCC2Q9H1I8 757 aaPredicted RBP11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 ABHD10Q9NUJ1 306 aa11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 SELENONQ9NZV5 590 aa11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 NR2E3Q9Y5X4 410 aa11.9□□□□□ -0.51
SEMA4B-204ENST00000558065 HOXD13P35453 343 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 ETFBP38117 255 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 NAA20P61599 178 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 PNOCQ13519 176 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 MTMR3Q13615 1198 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 TGFBIQ15582 683 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 TXNDC2Q86VQ3 553 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 LILRB2Q8N423 598 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 LINC00301Q8NCQ3 95 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 CFAP61Q8NHU2 1237 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 BRSK1Q8TDC3 778 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 SNX25Q9H3E2 840 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 VILLO15195 856 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 PFKFB1P16118 471 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 HSD17B3P37058 310 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 HSD17B4P51659 736 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 NLRP9Q7RTR0 991 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 FOXP4Q8IVH2 680 aaPredicted RBP11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 TMEM151BQ8IW70 566 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 ANKRD36BP1Q96IX9 119 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 USP29Q9HBJ7 922 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 SGTAO43765 313 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 GLRX3O76003 335 aaKnown RBP11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 NDUFA5Q16718 116 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 IFT20Q8IY31 132 aa11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 RAVER1Q8IY67 606 aaKnown RBP11.89□□□□□ -0.51
SEMA4B-204ENST00000558065 CNOT10Q9H9A5 744 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms