RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 XPO4Q9C0E2 1151 aaKnown RBP8.24□□□□□ -1.09
SPG11-204ENST00000557866 KCNF1Q9H3M0 494 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 EHMT1Q9H9B1 1298 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 SAMSN1Q9NSI8 373 aaKnown RBP8.24□□□□□ -1.09
SPG11-204ENST00000557866 INTS13Q9NVM9 706 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 RMND1Q9NWS8 449 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 HOXC10Q9NYD6 342 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 PNMA2Q9UL42 364 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 KIAA1024Q9UPX6 916 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 KCNH4Q9UQ05 1017 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 CTNND2Q9UQB3 1225 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 NFE2L3Q9Y4A8 694 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 CTDP1Q9Y5B0 961 aaPredicted RBP8.24□□□□□ -1.09
SPG11-204ENST00000557866 UBIAD1Q9Y5Z9 338 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.24□□□□□ -1.09
SPG11-204ENST00000557866 MYPNQ86TC9 1320 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 ATAD5Q96QE3 1844 aa8.24□□□□□ -1.09
SPG11-204ENST00000557866 E9PMD0 336 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 MEN1O00255 615 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 CNMDO75829 334 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 PTMAP06454 111 aaKnown RBP8.23□□□□□ -1.09
SPG11-204ENST00000557866 PLA2G4BP0C869 781 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 FCER1AP12319 257 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 EIF2AK2P19525 551 aaKnown RBP8.23□□□□□ -1.09
SPG11-204ENST00000557866 PTGS1P23219 599 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 RPA1P27694 616 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 HOXA7P31268 230 aaPredicted RBP8.23□□□□□ -1.09
SPG11-204ENST00000557866 PMS1P54277 932 aaKnown RBP8.23□□□□□ -1.09
SPG11-204ENST00000557866 SLC12A3P55017 1021 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 PSMC6P62333 389 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 ASIC1P78348 528 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 AMPD3Q01432 767 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 EHHADHQ08426 723 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 STK4Q13043 487 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 PPIL2Q13356 520 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 PPP2R5CQ13362 524 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 TKFCQ3LXA3 575 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 CCDC144BQ3MJ40 725 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 ARSHQ5FYA8 562 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 PCNX4Q63HM2 1172 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 MAP1SQ66K74 1059 aaPredicted RBP8.23□□□□□ -1.09
SPG11-204ENST00000557866 NSMFQ6X4W1 530 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 LBX2Q6XYB7 198 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 RNF207Q6ZRF8 634 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 UNC13DQ70J99 1090 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 NIPA1Q7RTP0 329 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 APTXQ7Z2E3 356 aaKnown RBP8.23□□□□□ -1.09
SPG11-204ENST00000557866 CCDC186Q7Z3E2 898 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 PRICKLE2Q7Z3G6 844 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 ZSCAN30Q86W11 494 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 VWA5B2Q8N398 1253 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 KIAA0895Q8NCT3 520 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 NELFBQ8WX92 580 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 HPS3Q969F9 1004 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 CDK5RAP3Q96JB5 506 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 NAP1L5Q96NT1 182 aaPredicted RBP8.23□□□□□ -1.09
SPG11-204ENST00000557866 HSD17B14Q9BPX1 270 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 EIF2AK1Q9BQI3 630 aaKnown RBP8.23□□□□□ -1.09
SPG11-204ENST00000557866 PDCD2LQ9BRP1 358 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 POLR3CQ9BUI4 534 aaPredicted RBP8.23□□□□□ -1.09
SPG11-204ENST00000557866 WDR11Q9BZH6 1224 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 UNC45AQ9H3U1 944 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 JADE2Q9NQC1 790 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 PXMP2Q9NR77 195 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 MAP3K20Q9NYL2 800 aaKnown RBP8.23□□□□□ -1.09
SPG11-204ENST00000557866 RGL1Q9NZL6 768 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 BTBD7Q9P203 1132 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 RWDD2AQ9UIY3 292 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 MAPK8IP1Q9UQF2 711 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 KDM3AQ9Y4C1 1321 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 MYH7BA7E2Y1 1941 aa8.23□□□□□ -1.09
SPG11-204ENST00000557866 PAPPA2Q9BXP8 1791 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 PHIPQ8WWQ0 1821 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 NPHP3-ACAD11A0A0J9YXS1 232 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 PVALEFA0A1B0GWK0 134 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 CDC14CA4D256 554 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 DHX15O43143 795 aaKnown RBP8.22□□□□□ -1.09
SPG11-204ENST00000557866 SLITRK3O94933 977 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 BCRP11274 1271 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 CYP11B2P19099 503 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 NF2P35240 595 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 TPM4P67936 248 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 SETQ01105 290 aaPredicted RBP8.22□□□□□ -1.09
SPG11-204ENST00000557866 PAK1Q13153 545 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 SEMA3FQ13275 785 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 ITGB3BPQ13352 177 aaPredicted RBP8.22□□□□□ -1.09
SPG11-204ENST00000557866 PGM5Q15124 567 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 HSP90AA4PQ58FG1 418 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 LRCH2Q5VUJ6 765 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 CDKAL1Q5VV42 579 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 GPAT2Q6NUI2 795 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 GADL1Q6ZQY3 521 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 DYMQ7RTS9 669 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 ARMC9Q7Z3E5 817 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 PNMA8AQ86V59 439 aaPredicted RBP8.22□□□□□ -1.09
SPG11-204ENST00000557866 OPTNQ96CV9 577 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 CNTNAP3BQ96NU0 1288 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 RMDN3Q96TC7 470 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 ZNF577Q9BSK1 485 aa8.22□□□□□ -1.09
SPG11-204ENST00000557866 COL25A1Q9BXS0 654 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms