RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 UNCXA6NJT0 531 aa4.97□□□□□ -1.61
FOXN3-217ENST00000557572 ITGB1P05556 798 aa4.97□□□□□ -1.61
FOXN3-217ENST00000557572 NCAPHQ15003 741 aa4.97□□□□□ -1.61
FOXN3-217ENST00000557572 PRSS53Q2L4Q9 553 aa4.97□□□□□ -1.61
FOXN3-217ENST00000557572 VHLLQ6RSH7 139 aa4.97□□□□□ -1.61
FOXN3-217ENST00000557572 DHX37Q8IY37 1157 aaKnown RBP4.97□□□□□ -1.61
FOXN3-217ENST00000557572 WASF1Q92558 559 aa4.97□□□□□ -1.61
FOXN3-217ENST00000557572 SHDQ96IW2 340 aa4.97□□□□□ -1.61
FOXN3-217ENST00000557572 GPR87Q9BY21 358 aa4.97□□□□□ -1.61
FOXN3-217ENST00000557572 PRDM13Q9H4Q3 707 aa4.97□□□□□ -1.61
FOXN3-217ENST00000557572 FAM184BQ9ULE4 1060 aa4.97□□□□□ -1.61
FOXN3-217ENST00000557572 NUB1Q9Y5A7 615 aa4.97□□□□□ -1.61
FOXN3-217ENST00000557572 HOXB6P17509 224 aaKnown RBP4.96□□□□□ -1.62
FOXN3-217ENST00000557572 KCNJ6P48051 423 aa4.96□□□□□ -1.62
FOXN3-217ENST00000557572 RIN1Q13671 783 aa4.96□□□□□ -1.62
FOXN3-217ENST00000557572 PPP2R5EQ16537 467 aa4.96□□□□□ -1.62
FOXN3-217ENST00000557572 RABL3Q5HYI8 236 aa4.96□□□□□ -1.62
FOXN3-217ENST00000557572 NBPF6Q5VWK0 638 aa4.96□□□□□ -1.62
FOXN3-217ENST00000557572 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.96□□□□□ -1.62
FOXN3-217ENST00000557572 RTKN2Q8IZC4 609 aa4.96□□□□□ -1.62
FOXN3-217ENST00000557572 ZNF654Q8IZM8 581 aa4.96□□□□□ -1.62
FOXN3-217ENST00000557572 THAP3Q8WTV1 239 aaPredicted RBP4.96□□□□□ -1.62
FOXN3-217ENST00000557572 NBPF4Q96M43 638 aa4.96□□□□□ -1.62
FOXN3-217ENST00000557572 BACH2Q9BYV9 841 aa4.96□□□□□ -1.62
FOXN3-217ENST00000557572 CDIP1Q9H305 208 aa4.96□□□□□ -1.62
FOXN3-217ENST00000557572 FRMD4BQ9Y2L6 1034 aa4.96□□□□□ -1.62
FOXN3-217ENST00000557572 TELO2Q9Y4R8 837 aa4.96□□□□□ -1.62
FOXN3-217ENST00000557572 PCDHGB7Q9Y5F8 929 aa4.96□□□□□ -1.62
FOXN3-217ENST00000557572 A0A1W2PRX2 142 aa4.95□□□□□ -1.62
FOXN3-217ENST00000557572 GJA8P48165 433 aa4.95□□□□□ -1.62
FOXN3-217ENST00000557572 HGFACQ04756 655 aa4.95□□□□□ -1.62
FOXN3-217ENST00000557572 PAK2Q13177 524 aa4.95□□□□□ -1.62
FOXN3-217ENST00000557572 OTOP3Q7RTS5 596 aa4.95□□□□□ -1.62
FOXN3-217ENST00000557572 KRTAP2-2Q9BYT5 123 aa4.95□□□□□ -1.62
FOXN3-217ENST00000557572 SLC29A3Q9BZD2 475 aa4.95□□□□□ -1.62
FOXN3-217ENST00000557572 IGSF5Q9NSI5 407 aa4.95□□□□□ -1.62
FOXN3-217ENST00000557572 FBXO10Q9UK96 956 aa4.95□□□□□ -1.62
FOXN3-217ENST00000557572 EFR3BQ9Y2G0 817 aa4.95□□□□□ -1.62
FOXN3-217ENST00000557572 NPFFR2Q9Y5X5 522 aa4.95□□□□□ -1.62
FOXN3-217ENST00000557572 ACOT7O00154 380 aa4.94□□□□□ -1.62
FOXN3-217ENST00000557572 COL6A2P12110 1019 aa4.94□□□□□ -1.62
FOXN3-217ENST00000557572 EIF4HQ15056 248 aaKnown RBP4.94□□□□□ -1.62
FOXN3-217ENST00000557572 PRR16Q569H4 304 aa4.94□□□□□ -1.62
FOXN3-217ENST00000557572 OTOP2Q7RTS6 562 aa4.94□□□□□ -1.62
FOXN3-217ENST00000557572 NELL1Q92832 810 aa4.94□□□□□ -1.62
FOXN3-217ENST00000557572 STRIP2Q9ULQ0 834 aa4.94□□□□□ -1.62
FOXN3-217ENST00000557572 PMS2P1A4D2B8 440 aa4.93□□□□□ -1.62
FOXN3-217ENST00000557572 CAPNS1P04632 268 aa4.93□□□□□ -1.62
FOXN3-217ENST00000557572 SF1Q15637 639 aaKnown RBP4.93□□□□□ -1.62
FOXN3-217ENST00000557572 TRIM68Q6AZZ1 485 aa4.93□□□□□ -1.62
FOXN3-217ENST00000557572 LRRC55Q6ZSA7 311 aa4.93□□□□□ -1.62
FOXN3-217ENST00000557572 UHMK1Q8TAS1 419 aaKnown RBP4.93□□□□□ -1.62
FOXN3-217ENST00000557572 GPRASP2Q96D09 838 aa4.93□□□□□ -1.62
FOXN3-217ENST00000557572 SEC16BQ96JE7 1060 aa4.93□□□□□ -1.62
FOXN3-217ENST00000557572 SPATA5L1Q9BVQ7 753 aa4.93□□□□□ -1.62
FOXN3-217ENST00000557572 ARHGAP28Q9P2N2 729 aa4.93□□□□□ -1.62
FOXN3-217ENST00000557572 TRPS1Q9UHF7 1281 aa4.93□□□□□ -1.62
FOXN3-217ENST00000557572 INSL6Q9Y581 213 aa4.93□□□□□ -1.62
FOXN3-217ENST00000557572 TBX1O43435 398 aa4.92□□□□□ -1.62
FOXN3-217ENST00000557572 ZNF16P17020 682 aaPredicted RBP4.92□□□□□ -1.62
FOXN3-217ENST00000557572 NR4A1P22736 598 aa4.92□□□□□ -1.62
FOXN3-217ENST00000557572 VAMP1P23763 118 aa4.92□□□□□ -1.62
FOXN3-217ENST00000557572 PTH2RP49190 550 aa4.92□□□□□ -1.62
FOXN3-217ENST00000557572 IL13RA1P78552 427 aa4.92□□□□□ -1.62
FOXN3-217ENST00000557572 DBPQ10586 325 aaPredicted RBP4.92□□□□□ -1.62
FOXN3-217ENST00000557572 PGBD4Q96DM1 585 aa4.92□□□□□ -1.62
FOXN3-217ENST00000557572 PPARGC1AQ9UBK2 798 aaKnown RBP4.92□□□□□ -1.62
FOXN3-217ENST00000557572 C1RP00736 705 aa4.91□□□□□ -1.62
FOXN3-217ENST00000557572 USP14P54578 494 aa4.91□□□□□ -1.62
FOXN3-217ENST00000557572 ELAVL1Q15717 326 aaKnown RBP4.91□□□□□ -1.62
FOXN3-217ENST00000557572 DENND5AQ6IQ26 1287 aa4.91□□□□□ -1.62
FOXN3-217ENST00000557572 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
FOXN3-217ENST00000557572 CXXC5Q7LFL8 322 aaKnown RBP4.91□□□□□ -1.62
FOXN3-217ENST00000557572 SUPT20HQ8NEM7 779 aa4.91□□□□□ -1.62
FOXN3-217ENST00000557572 C1orf159Q96HA4 380 aa4.91□□□□□ -1.62
FOXN3-217ENST00000557572 HS3ST4Q9Y661 456 aa4.91□□□□□ -1.62
FOXN3-217ENST00000557572 COL11A2P13942 1736 aaPredicted RBP4.91□□□□□ -1.62
FOXN3-217ENST00000557572 DNAJC9-AS1A6NH13 148 aa4.9□□□□□ -1.63
FOXN3-217ENST00000557572 NKRFO15226 690 aaKnown RBP eCLIP4.9□□□□□ -1.63
FOXN3-217ENST00000557572 PPFIA4O75335 1185 aa4.9□□□□□ -1.63
FOXN3-217ENST00000557572 GNAT1P11488 350 aa4.9□□□□□ -1.63
FOXN3-217ENST00000557572 GFRA1P56159 465 aa4.9□□□□□ -1.63
FOXN3-217ENST00000557572 SMAD3P84022 425 aaKnown RBP4.9□□□□□ -1.63
FOXN3-217ENST00000557572 TAP1Q03518 808 aa4.9□□□□□ -1.63
FOXN3-217ENST00000557572 SPIRE1Q08AE8 756 aa4.9□□□□□ -1.63
FOXN3-217ENST00000557572 TIGD2Q4W5G0 525 aa4.9□□□□□ -1.63
FOXN3-217ENST00000557572 KCTD1Q719H9 257 aa4.9□□□□□ -1.63
FOXN3-217ENST00000557572 Q8N9P0 234 aaPredicted RBP4.9□□□□□ -1.63
FOXN3-217ENST00000557572 DSEQ9UL01 958 aa4.9□□□□□ -1.63
FOXN3-217ENST00000557572 SCAMP3O14828 347 aaKnown RBP4.89□□□□□ -1.63
FOXN3-217ENST00000557572 ZNF185O15231 689 aa4.89□□□□□ -1.63
FOXN3-217ENST00000557572 STAT3P40763 770 aa4.89□□□□□ -1.63
FOXN3-217ENST00000557572 SAFB2Q14151 953 aaKnown RBP eCLIP4.89□□□□□ -1.63
FOXN3-217ENST00000557572 SLC35F1Q5T1Q4 408 aa4.89□□□□□ -1.63
FOXN3-217ENST00000557572 RSPO2Q6UXX9 243 aaPredicted RBP4.89□□□□□ -1.63
FOXN3-217ENST00000557572 ZNF227Q86WZ6 799 aa4.89□□□□□ -1.63
FOXN3-217ENST00000557572 BOLLQ8N9W6 283 aaKnown RBP4.89□□□□□ -1.63
FOXN3-217ENST00000557572 RABGGTAQ92696 567 aa4.89□□□□□ -1.63
FOXN3-217ENST00000557572 KCNJ15Q99712 375 aa4.89□□□□□ -1.63
FOXN3-217ENST00000557572 LRP2BPQ9P2M1 347 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms