RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 RPAINQ86UA6 219 aa17.86■□□□□ 0.45
TUBB3-214ENST00000557490 DNAJB3Q8WWF6 145 aa17.86■□□□□ 0.45
TUBB3-214ENST00000557490 CEP131Q9UPN4 1083 aa17.86■□□□□ 0.45
TUBB3-214ENST00000557490 PCDHA2Q9Y5H9 948 aa17.86■□□□□ 0.45
TUBB3-214ENST00000557490 IGSF9BQ9UPX0 1349 aa17.86■□□□□ 0.45
TUBB3-214ENST00000557490 GRXCR1A8MXD5 290 aa17.85■□□□□ 0.45
TUBB3-214ENST00000557490 NEMFO60524 1076 aa17.85■□□□□ 0.45
TUBB3-214ENST00000557490 BAIAP3O94812 1187 aa17.85■□□□□ 0.45
TUBB3-214ENST00000557490 OATP04181 439 aa17.85■□□□□ 0.45
TUBB3-214ENST00000557490 IGFBP4P22692 258 aa17.85■□□□□ 0.45
TUBB3-214ENST00000557490 GJB2P29033 226 aa17.85■□□□□ 0.45
TUBB3-214ENST00000557490 FAM26DQ5JW98 314 aa17.85■□□□□ 0.45
TUBB3-214ENST00000557490 CNKSR3Q6P9H4 555 aa17.85■□□□□ 0.45
TUBB3-214ENST00000557490 MTHFD1LQ6UB35 978 aa17.85■□□□□ 0.45
TUBB3-214ENST00000557490 NOSTRINQ8IVI9 506 aa17.85■□□□□ 0.45
TUBB3-214ENST00000557490 HAS1Q92839 578 aa17.85■□□□□ 0.45
TUBB3-214ENST00000557490 FAM49AQ9H0Q0 323 aaPredicted RBP17.85■□□□□ 0.45
TUBB3-214ENST00000557490 VAV3Q9UKW4 847 aa17.85■□□□□ 0.45
TUBB3-214ENST00000557490 NOL7Q9UMY1 257 aaKnown RBP17.85■□□□□ 0.45
TUBB3-214ENST00000557490 KLRC1P26715 233 aa17.84■□□□□ 0.45
TUBB3-214ENST00000557490 PRKCEQ02156 737 aa17.84■□□□□ 0.45
TUBB3-214ENST00000557490 TFF2Q03403 129 aa17.84■□□□□ 0.45
TUBB3-214ENST00000557490 MBTPS1Q14703 1052 aa17.84■□□□□ 0.45
TUBB3-214ENST00000557490 ZBTB10Q96DT7 871 aa17.84■□□□□ 0.45
TUBB3-214ENST00000557490 TRANK1O15050 2925 aa17.84■□□□□ 0.45
TUBB3-214ENST00000557490 TANC1Q9C0D5 1861 aa17.84■□□□□ 0.45
TUBB3-214ENST00000557490 TRIP12Q14669 1992 aaPredicted RBP17.83■□□□□ 0.44
TUBB3-214ENST00000557490 SMIM35A0A1B0GVV1 85 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 H3BQV1 296 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 M0QZ92 97 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 EML1O00423 815 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 ZNF862O60290 1169 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 DKC1O60832 514 aaKnown RBP eCLIP17.83■□□□□ 0.44
TUBB3-214ENST00000557490 MCM7P33993 719 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 KCNJ6P48051 423 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 KCNQ1P51787 676 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 PSMC5P62195 406 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 MRPS6P82932 125 aaKnown RBP17.83■□□□□ 0.44
TUBB3-214ENST00000557490 UGCGQ16739 394 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 IER5Q5VY09 327 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 NME8Q8N427 588 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 C11orf16Q9NQ32 467 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 GBF1Q92538 1859 aa17.83■□□□□ 0.44
TUBB3-214ENST00000557490 ABHD14A-ACY1A0A1B0GW23 586 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 ZBTB42B2RXF5 422 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 KIF28PB7ZC32 967 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 WNT7AO00755 349 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 MAGEB2O15479 319 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 EFCAB14O75071 495 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 CHRNA1P02708 482 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 ATP2A2P16615 1042 aaKnown RBP17.82■□□□□ 0.44
TUBB3-214ENST00000557490 U2AF2P26368 475 aaKnown RBP eCLIP17.82■□□□□ 0.44
TUBB3-214ENST00000557490 TRAPPC10P48553 1259 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 ORC2Q13416 577 aaPredicted RBP17.82■□□□□ 0.44
TUBB3-214ENST00000557490 CUL4AQ13619 759 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 IKBKEQ14164 716 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 EPHA7Q15375 998 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 XKR3Q5GH77 459 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 MCTP1Q6DN14 999 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 NCAPH2Q6IBW4 605 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 BANK1Q8NDB2 785 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 SEPT8Q92599 483 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 SLC9A7Q96T83 725 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 TSPYL2Q9H2G4 693 aaPredicted RBP17.82■□□□□ 0.44
TUBB3-214ENST00000557490 SEPT9Q9UHD8 586 aaPredicted RBP17.82■□□□□ 0.44
TUBB3-214ENST00000557490 PCDHA12Q9UN75 941 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 CDY2AQ9Y6F7 541 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 KAT6AQ92794 2004 aa17.82■□□□□ 0.44
TUBB3-214ENST00000557490 SCN5AQ14524 2016 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 C22orf31O95567 290 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 P4HBP07237 508 aaKnown RBP17.81■□□□□ 0.44
TUBB3-214ENST00000557490 TXKP42681 527 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 QARSP47897 775 aaKnown RBP17.81■□□□□ 0.44
TUBB3-214ENST00000557490 MGAT3Q09327 533 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 ZNF174Q15697 407 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 RAB30Q15771 203 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 PLEKHG4Q58EX7 1191 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 TTC38Q5R3I4 469 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 METTL13Q8N6R0 699 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 DBF4BQ8NFT6 615 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 PHOSPHO2Q8TCD6 241 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 TTC12Q9H892 705 aaPredicted RBP17.81■□□□□ 0.44
TUBB3-214ENST00000557490 MSRAQ9UJ68 235 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 TRPV2Q9Y5S1 764 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 PRRC2BQ5JSZ5 2229 aaKnown RBP17.81■□□□□ 0.44
TUBB3-214ENST00000557490 CACNA1AO00555 2505 aa17.81■□□□□ 0.44
TUBB3-214ENST00000557490 DDX11L8A8MPP1 907 aa17.8■□□□□ 0.44
TUBB3-214ENST00000557490 TMEM62Q0P6H9 643 aa17.8■□□□□ 0.44
TUBB3-214ENST00000557490 AAK1Q2M2I8 961 aa17.8■□□□□ 0.44
TUBB3-214ENST00000557490 LARP1BQ659C4 914 aaKnown RBP17.8■□□□□ 0.44
TUBB3-214ENST00000557490 APBB2Q92870 758 aa17.8■□□□□ 0.44
TUBB3-214ENST00000557490 MTMR9Q96QG7 549 aa17.8■□□□□ 0.44
TUBB3-214ENST00000557490 NIFKQ9BYG3 293 aaKnown RBP17.8■□□□□ 0.44
TUBB3-214ENST00000557490 TMEM60Q9H2L4 133 aa17.8■□□□□ 0.44
TUBB3-214ENST00000557490 GPR37L1O60883 481 aa17.79■□□□□ 0.44
TUBB3-214ENST00000557490 GHRP10912 638 aa17.79■□□□□ 0.44
TUBB3-214ENST00000557490 TMOD1P28289 359 aa17.79■□□□□ 0.44
TUBB3-214ENST00000557490 WDR5P61964 334 aaKnown RBP17.79■□□□□ 0.44
TUBB3-214ENST00000557490 SPIRE1Q08AE8 756 aa17.79■□□□□ 0.44
TUBB3-214ENST00000557490 TBC1D8BQ0IIM8 1120 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms