RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 CCT6AP40227 531 aaKnown RBP16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 DNM1Q05193 864 aaKnown RBP16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 SLC39A14Q15043 492 aa16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 STK38Q15208 465 aa16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 POTEGQ6S5H5 508 aa16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 CCDC155Q8N6L0 562 aa16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 LINC00301Q8NCQ3 95 aa16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 CAGE1Q8TC20 777 aa16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 BADQ92934 168 aa16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 CEP89Q96ST8 783 aa16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 MMTAG2Q9BU76 263 aaKnown RBP16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 MORC2Q9Y6X9 1032 aaPredicted RBP16.62■□□□□ 0.25
VIPAS39-210ENST00000557466 A0A087WWV3 80 aa16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 PITPNM1O00562 1244 aa16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 YEATS4O95619 227 aa16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 CKBP12277 381 aa16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 CCL23P55773 120 aa16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 NPEPPSP55786 919 aa16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 NUCB2P80303 420 aa16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 MDM2Q00987 491 aaPredicted RBP16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 BFSP2Q13515 415 aa16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 ECM1Q16610 540 aa16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 TAF2Q6P1X5 1199 aa16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 ZNF579Q8NAF0 562 aaKnown RBP16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 FAM49AQ9H0Q0 323 aaPredicted RBP16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 CYP26B1Q9NR63 512 aa16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 PCDHA2Q9Y5H9 948 aa16.61■□□□□ 0.25
VIPAS39-210ENST00000557466 SMIM35A0A1B0GVV1 85 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 LONP1P36776 959 aaKnown RBP16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 THPOP40225 353 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 MAGEA10P43363 369 aaPredicted RBP16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 XKR9Q5GH70 373 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 ZNF618Q5T7W0 954 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 KRT79Q5XKE5 535 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 ATL3Q6DD88 541 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 MFSD5Q6N075 450 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 TRAF7Q6Q0C0 670 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 LRRC8DQ7L1W4 858 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 LINC01465Q8N7H1 131 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 PIGOQ8TEQ8 1089 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 DNAJB3Q8WWF6 145 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 SCLYQ96I15 445 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 AK8Q96MA6 479 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 CLIC6Q96NY7 704 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 CSRNP2Q9H175 543 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 SRPRBQ9Y5M8 271 aaKnown RBP16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 STK24Q9Y6E0 443 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 DNAH12Q6ZR08 3092 aa16.6■□□□□ 0.25
VIPAS39-210ENST00000557466 RBAK-RBAKDNI3L0D1 243 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 SPTLC2O15270 562 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 MAGEB2O15479 319 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 CTSHP09668 335 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 SELPP16109 830 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 MUTP22033 750 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 CLCN3P51790 818 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 TBC1D8BQ0IIM8 1120 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 OTUD6AQ7L8S5 288 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 LRRC71Q8N4P6 559 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 RETREG2Q8NC44 543 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 CEP170P1Q96L14 293 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 LBHD1Q9BQE6 289 aaPredicted RBP16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 ANKEF1Q9NU02 776 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 DDX19AQ9NUU7 478 aaKnown RBP16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 KDM3AQ9Y4C1 1321 aa16.59■□□□□ 0.25
VIPAS39-210ENST00000557466 TET1Q8NFU7 2136 aa16.58■□□□□ 0.25
VIPAS39-210ENST00000557466 CAND2O75155 1236 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 PPP6R2O75170 966 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 IQCF3P0C7M6 154 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 CSF2RAP15509 400 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 RARRES1P49788 294 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 FPGSQ05932 587 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 GRB10Q13322 594 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 SPECC1Q5M775 1068 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 HYIQ5T013 277 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 RPAINQ86UA6 219 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 CABP7Q86V35 215 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 TMEM199Q8N511 208 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 METTL13Q8N6R0 699 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 KRI1Q8N9T8 703 aaKnown RBP16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 CCDC43Q96MW1 224 aaKnown RBP16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 PNMA5Q96PV4 448 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 NACC1Q96RE7 527 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 GDF15Q99988 308 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 BMP2KQ9NSY1 1161 aaPredicted RBP16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 CFAP45Q9UL16 551 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 CIZ1Q9ULV3 898 aaPredicted RBP16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 KIAA1024Q9UPX6 916 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 PPME1Q9Y570 386 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 ATP6V1DQ9Y5K8 247 aa16.58■□□□□ 0.24
VIPAS39-210ENST00000557466 CEP290O15078 2479 aa16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 IGKV6-21A0A0C4DH24 114 aa16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 MAFO75444 373 aaPredicted RBP16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 NCLP19338 710 aaKnown RBP16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 POLGP54098 1239 aaPredicted RBP16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 KRT85P78386 507 aa16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 MRPS6P82932 125 aaKnown RBP16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 MGAT3Q09327 533 aa16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 TMEM62Q0P6H9 643 aa16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 DRP2Q13474 957 aa16.57■□□□□ 0.24
VIPAS39-210ENST00000557466 MBTPS1Q14703 1052 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms