RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 PIGOQ8TEQ8 1089 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 KLRC1P26715 233 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 MXI1P50539 228 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 RWDD2BP57060 319 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 EARS2Q5JPH6 523 aaKnown RBP16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 RILPQ96NA2 401 aa16.23■□□□□ 0.19
ARHGEF40-207ENST00000556399 HSPA1LP34931 641 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 NAB2Q15742 525 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 ACCSQ96QU6 501 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 C1orf167Q5SNV9 1468 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 TTI1O43156 1089 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 PKN1Q16512 942 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 PTGISQ16647 500 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 SBK1Q52WX2 424 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 HAUS2Q9NVX0 235 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 LRRD1A4D1F6 860 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 STAT3P40763 770 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 ITIH3Q06033 890 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 DRAP1Q14919 205 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 SEC23AQ15436 765 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 TMOD1P28289 359 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 HOXA13P31271 388 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 AOC3Q16853 763 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 PHLDB3Q6NSJ2 640 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 POMGNT1Q8WZA1 660 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 HOOK2Q96ED9 719 aa16.22■□□□□ 0.19
ARHGEF40-207ENST00000556399 SNAP25P60880 206 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 LMNB2Q03252 620 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 DDX42Q86XP3 938 aaKnown RBP eCLIP16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 USP38Q8NB14 1042 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 NEDD1Q8NHV4 660 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 CYFIP2Q96F07 1278 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 GBP5Q96PP8 586 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 TMEM206Q9H813 350 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 MLXIPLQ9NP71 852 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 NPHP3-ACAD11A0A0J9YXS1 232 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 TCRBV5S4A2TA0A5A2 114 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 FAM187AA6NFU0 413 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 USP17L10C9JJH3 530 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 TOM1O60784 492 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 ACTN1P12814 892 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 PPP1R18Q6NYC8 613 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.21■□□□□ 0.197e-11■□□□□ 10
ARHGEF40-207ENST00000556399 CCDC110Q8TBZ0 833 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 WDR11Q9BZH6 1224 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 FAM107AO95990 144 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 GRAPQ13588 217 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 PHLDB2Q86SQ0 1253 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 GRAPLQ8TC17 118 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 RFFLQ8WZ73 363 aa16.21■□□□□ 0.19
ARHGEF40-207ENST00000556399 PHF20L1A8MW92 1017 aa16.21■□□□□ 0.18
ARHGEF40-207ENST00000556399 PMS1P54277 932 aaKnown RBP16.21■□□□□ 0.18
ARHGEF40-207ENST00000556399 EXOC1LA0A1B0GW35 172 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 EVI5O60447 810 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 PRLRP16471 622 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 LIG4P49917 911 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 DMP1Q13316 513 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 PPP2R5AQ15172 486 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 FRMD5Q7Z6J6 570 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 SPATS2LQ9NUQ6 558 aaKnown RBP16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 GDF11O95390 407 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 AP3B2Q13367 1082 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 KDM7AQ6ZMT4 941 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 PAXIP1Q6ZW49 1069 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 NLRX1Q86UT6 975 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 TRIM51Q9BSJ1 452 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 PITPNM3Q9BZ71 974 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 TESPA1A2RU30 521 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 CHRNA3P32297 505 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 GPC5P78333 572 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 ZNF449Q6P9G9 518 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 RNF207Q6ZRF8 634 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 CFAP57Q96MR6 1250 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 ISCUQ9H1K1 167 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 NWD1Q149M9 1564 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 MYO5BQ9ULV0 1848 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 MYO1EQ12965 1108 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 LRRC14Q15048 493 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 FIGNQ5HY92 759 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 ANKS1AQ92625 1134 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 THOC1Q96FV9 657 aaKnown RBP16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 SEC16BQ96JE7 1060 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 GOLPH3Q9H4A6 298 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 KBTBD4Q9NVX7 518 aa16.2■□□□□ 0.18
ARHGEF40-207ENST00000556399 RIMS1Q86UR5 1692 aaKnown RBP16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 MEGF6O75095 1541 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 BPIFB4P59827 614 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 CDK17Q00537 523 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 SPATA24Q86W54 205 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 ADGRF4Q8IZF3 695 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 CASKIN2Q8WXE0 1202 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 TRIM11Q96F44 468 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 DHX36Q9H2U1 1008 aaKnown RBP16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 TXNDC9O14530 226 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 CLGNO14967 610 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 UCHL3P15374 230 aa16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 BYSLQ13895 437 aaKnown RBP16.19■□□□□ 0.18
ARHGEF40-207ENST00000556399 SYDE2Q5VT97 1194 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms