RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 CYP4F22Q6NT55 531 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 TMC4Q7Z404 712 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 DNAJC10Q8IXB1 793 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 FIBCD1Q8N539 461 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 Q8TCH9 128 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 SNX27Q96L92 541 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 SYT3Q9BQG1 590 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 IKZF4Q9H2S9 585 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 C4AP0C0L4 1744 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 RBBP6Q7Z6E9 1792 aaKnown RBP4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 DLEC1Q9Y238 1755 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 MAP2P11137 1827 aaKnown RBP4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 SCN4AP35499 1836 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 FER1L6Q2WGJ9 1857 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 AKAP11Q9UKA4 1901 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 RGPD2P0DJD1 1756 aa4.33□□□□□ -1.72
EFCAB11-210ENST00000556078 A0A087WZG4 1122 aa4.33□□□□□ -1.72
EFCAB11-210ENST00000556078 CD3EP07766 207 aa4.33□□□□□ -1.72
EFCAB11-210ENST00000556078 CRKP46108 304 aa4.33□□□□□ -1.72
EFCAB11-210ENST00000556078 KRTAP10-9P60411 292 aa4.33□□□□□ -1.72
EFCAB11-210ENST00000556078 GRM1Q13255 1194 aa4.33□□□□□ -1.72
EFCAB11-210ENST00000556078 ARHGEF18Q6ZSZ5 1173 aa4.33□□□□□ -1.72
EFCAB11-210ENST00000556078 TOM1L2Q6ZVM7 507 aa4.33□□□□□ -1.72
EFCAB11-210ENST00000556078 ZC3H18Q86VM9 953 aaKnown RBP4.33□□□□□ -1.72
EFCAB11-210ENST00000556078 BRF1Q92994 677 aa4.33□□□□□ -1.72
EFCAB11-210ENST00000556078 ZNF503Q96F45 646 aa4.33□□□□□ -1.72
EFCAB11-210ENST00000556078 YTHDC1Q96MU7 727 aaKnown RBP4.33□□□□□ -1.72
EFCAB11-210ENST00000556078 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.33□□□□□ -1.72
EFCAB11-210ENST00000556078 ITGB4P16144 1822 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 GPRASP1Q5JY77 1395 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 ABCC11Q96J66 1382 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 ADGRF5Q8IZF2 1346 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 EXOC5O00471 708 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 IGSF3O75054 1194 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 CYP1A1P04798 512 aaPredicted RBP4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 CD247P20963 164 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 EIF4A3P38919 411 aaKnown RBP4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 CD300LDQ6UXZ3 194 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 GK5Q6ZS86 529 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 ERMP1Q7Z2K6 904 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 DCP2Q8IU60 420 aaKnown RBP4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 FAM26EQ8N5C1 309 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 BCL2L13Q9BXK5 485 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 BCL11AQ9H165 835 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 KBTBD4Q9NVX7 518 aa4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 AFDNP55196 1824 aaKnown RBP4.32□□□□□ -1.72
EFCAB11-210ENST00000556078 ANKARQ7Z5J8 1434 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 YTHDC2Q9H6S0 1430 aaKnown RBP4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 ANKRD50Q9ULJ7 1429 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 AURKAO14965 403 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 PLA2G5P39877 138 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 ZNF165P49910 485 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 HS1BP3Q53T59 392 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 AXDND1Q5T1B0 1012 aaPredicted RBP4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 PRAMEF18Q5VWM3 479 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 DCAF15Q66K64 600 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 RNF207Q6ZRF8 634 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 STK32CQ86UX6 486 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 CAPNS2Q96L46 248 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 GPR101Q96P66 508 aaPredicted RBP4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 TMEM168Q9H0V1 697 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 MEGF9Q9H1U4 602 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 NGRNQ9NPE2 291 aaKnown RBP4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 JADE2Q9NQC1 790 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 DLL4Q9NR61 685 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 CCNL1Q9UK58 526 aaPredicted RBP4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 DIS3Q9Y2L1 958 aaKnown RBP4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 SIT1Q9Y3P8 196 aa4.31□□□□□ -1.72
EFCAB11-210ENST00000556078 PPIP5K1Q6PFW1 1433 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 VPS8Q8N3P4 1428 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 ANKRD30BQ9BXX2 1392 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 ANKRD30AQ9BXX3 1397 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 WDR17Q8IZU2 1322 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 LOC105371045A0A1W2PR82 267 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 ZNF202O95125 648 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 GCP02774 474 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 NTRK1P04629 796 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 ERCC3P19447 782 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 MCM7P33993 719 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 SEZ6Q53EL9 994 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 PPFIBP1Q86W92 1011 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 KBTBD2Q8IY47 623 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 TAB3Q8N5C8 712 aaPredicted RBP4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 USP33Q8TEY7 942 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 ZNF296Q8WUU4 475 aaPredicted RBP4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 MRRFQ96E11 262 aaKnown RBP4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 PTPN18Q99952 460 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 TRIM8Q9BZR9 551 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 L2HGDHQ9H9P8 463 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 GULP1Q9UBP9 304 aa4.3□□□□□ -1.72
EFCAB11-210ENST00000556078 PCSK5Q92824 1860 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 TRBV23OR9-2A0A075B6M9 112 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 NARSO43776 548 aaKnown RBP4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 DDNO94850 711 aaPredicted RBP4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 MMP10P09238 476 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 ITGA4P13612 1032 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 CHRNA5P30532 468 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 IL13P35225 146 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 INHBCP55103 352 aa4.29□□□□□ -1.72
EFCAB11-210ENST00000556078 ADAM9Q13443 819 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms