RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 PTGISQ16647 500 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 UGCGQ16739 394 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 HYIQ5T013 277 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 AXDND1Q5T1B0 1012 aaPredicted RBP8.52□□□□□ -1.05
TDP1-214ENST00000556063 TAF2Q6P1X5 1199 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 POTEGQ6S5H5 508 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 UBE2Q1Q7Z7E8 422 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 RSPH3Q86UC2 560 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 ZNF710Q8N1W2 664 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 CCDC155Q8N6L0 562 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 RETREG2Q8NC44 543 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 SLC7A3Q8WY07 619 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 SYMPKQ92797 1274 aaKnown RBP8.52□□□□□ -1.05
TDP1-214ENST00000556063 CEP170P1Q96L14 293 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 GDPD2Q9HCC8 539 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 CYP26B1Q9NR63 512 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 SETD4Q9NVD3 440 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 STK17AQ9UEE5 414 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 TUBE1Q9UJT0 475 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 DBR1Q9UK59 544 aaKnown RBP8.52□□□□□ -1.05
TDP1-214ENST00000556063 EVPLQ92817 2033 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 GRIN2DO15399 1336 aa8.52□□□□□ -1.05
TDP1-214ENST00000556063 GAS2O43903 313 aaKnown RBP8.51□□□□□ -1.05
TDP1-214ENST00000556063 PQBP1O60828 265 aaKnown RBP8.51□□□□□ -1.05
TDP1-214ENST00000556063 DGAT1O75907 488 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 EYA4O95677 639 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 SSBP05455 408 aaKnown RBP eCLIP8.51□□□□□ -1.05
TDP1-214ENST00000556063 ATP4AP20648 1035 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 KLRC1P26715 233 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 STAT6P42226 847 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 DNM2P50570 870 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 POLGP54098 1239 aaPredicted RBP8.51□□□□□ -1.05
TDP1-214ENST00000556063 RTP1P59025 263 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 IGBP1P78318 339 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 TLE2Q04725 743 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 BFSP2Q13515 415 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 KARSQ15046 597 aaKnown RBP8.51□□□□□ -1.05
TDP1-214ENST00000556063 TRIM60Q495X7 471 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 MTERF2Q49AM1 385 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 SPECC1Q5M775 1068 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 RESP18Q5W5W9 173 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 SHC4Q6S5L8 630 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 CLEC17AQ6ZS10 378 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 ANO5Q75V66 913 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 ANKRD33Q7Z3H0 272 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 FAM126BQ8IXS8 530 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 IQUBQ8NA54 791 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 PIGOQ8TEQ8 1089 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 LMBR1Q8WVP7 490 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 TCP11Q8WWU5 503 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 MRPS27Q92552 414 aaKnown RBP8.51□□□□□ -1.05
TDP1-214ENST00000556063 EPSTI1Q96J88 318 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 CHAMP1Q96JM3 812 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 MAP7D2Q96T17 732 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 MMTAG2Q9BU76 263 aaKnown RBP8.51□□□□□ -1.05
TDP1-214ENST00000556063 LRRC27Q9C0I9 530 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 BHMT2Q9H2M3 363 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 CUEDC2Q9H467 287 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 BMP2KQ9NSY1 1161 aaPredicted RBP8.51□□□□□ -1.05
TDP1-214ENST00000556063 PRKAG2Q9UGJ0 569 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 USP25Q9UHP3 1055 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 ATP11BQ9Y2G3 1177 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 PCDHA2Q9Y5H9 948 aa8.51□□□□□ -1.05
TDP1-214ENST00000556063 SMIM35A0A1B0GVV1 85 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 MBLAC1A4D2B0 266 aaPredicted RBP8.5□□□□□ -1.05
TDP1-214ENST00000556063 EVI5O60447 810 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 CAND2O75155 1236 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 STBD1O95210 358 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 CLTBP09497 229 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 CYP2C9P11712 490 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 PLCG1P19174 1290 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 HOXC8P31273 242 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 SYKP43405 635 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 RARRES1P49788 294 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 NPEPPSP55786 919 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 CDC42EP1Q00587 391 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 AMPD3Q01432 767 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 PTK7Q13308 1070 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 GRB10Q13322 594 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 TARBP2Q15633 366 aaKnown RBP8.5□□□□□ -1.05
TDP1-214ENST00000556063 LRRC26Q2I0M4 334 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 TMEM119Q4V9L6 283 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 PDE4DIPQ5VU43 2346 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 PLA2G4FQ68DD2 849 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 GDF6Q6KF10 455 aaPredicted RBP8.5□□□□□ -1.05
TDP1-214ENST00000556063 PADI6Q6TGC4 694 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 MTHFD1LQ6UB35 978 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 USP49Q70CQ1 688 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 SERINC5Q86VE9 423 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 NME8Q8N427 588 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 METTL13Q8N6R0 699 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 PDILTQ8N807 584 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 FSIP1Q8NA03 581 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 TMEM87AQ8NBN3 555 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 MCPH1Q8NEM0 835 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 CAGE1Q8TC20 777 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 DPF3Q92784 378 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 PNMA5Q96PV4 448 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 PLIN2Q99541 437 aa8.5□□□□□ -1.05
TDP1-214ENST00000556063 TIPINQ9BVW5 301 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms