RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 TRIM9Q9C026 710 aa13.36□□□□□ -0.27
APEX1-212ENST00000556054 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.36□□□□□ -0.27
APEX1-212ENST00000556054 TUT1Q9H6E5 874 aaKnown RBP13.36□□□□□ -0.27
APEX1-212ENST00000556054 PAK6Q9NQU5 681 aaPredicted RBP13.36□□□□□ -0.27
APEX1-212ENST00000556054 PDLIM7Q9NR12 457 aa13.36□□□□□ -0.27
APEX1-212ENST00000556054 ARHGEF35A5YM69 484 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 GAS2O43903 313 aaKnown RBP13.35□□□□□ -0.27
APEX1-212ENST00000556054 SORBS3O60504 671 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 DGAT1O75907 488 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 CABYRO75952 493 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 SLC34A2O95436 690 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 C6orf222P0C671 652 aaPredicted RBP13.35□□□□□ -0.27
APEX1-212ENST00000556054 RFC5P40937 340 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 KCNB1Q14721 858 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 ARSHQ5FYA8 562 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 GNASQ5JWF2 1037 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 RINT1Q6NUQ1 792 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 RNF180Q86T96 592 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 CKAP2LQ8IYA6 745 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 TRIML1Q8N9V2 468 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 ARRDC4Q8NCT1 418 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 DNAJC19Q96DA6 116 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 CEP89Q96ST8 783 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 JPH2Q9BR39 696 aaPredicted RBP13.35□□□□□ -0.27
APEX1-212ENST00000556054 SEZ6LQ9BYH1 1024 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 CYP26B1Q9NR63 512 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 ODF2LQ9ULJ1 636 aa13.35□□□□□ -0.27
APEX1-212ENST00000556054 MYH11P35749 1972 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 FRMD3A2A2Y4 597 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 MOXD2PA6NHM9 499 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 MYMKA6NI61 221 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 RRN3P2A6NIE6 340 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 ZBTB39O15060 712 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 PTGS1P23219 599 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 AFMP43652 599 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 PURAQ00577 322 aaKnown RBP13.34□□□□□ -0.27
APEX1-212ENST00000556054 XKR9Q5GH70 373 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 COL13A1Q5TAT6 717 aaPredicted RBP13.34□□□□□ -0.27
APEX1-212ENST00000556054 PADI6Q6TGC4 694 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 GPBP1Q86WP2 473 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 MCPH1Q8NEM0 835 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 SH3TC2Q8TF17 1288 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 DDX12PQ92771 950 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 KAT2BQ92831 832 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 SMARCE1Q969G3 411 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 CCDC47Q96A33 483 aaKnown RBP13.34□□□□□ -0.27
APEX1-212ENST00000556054 CEP170P1Q96L14 293 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 CCDC43Q96MW1 224 aaKnown RBP13.34□□□□□ -0.27
APEX1-212ENST00000556054 MTG1Q9BT17 334 aaPredicted RBP13.34□□□□□ -0.27
APEX1-212ENST00000556054 DHX33Q9H6R0 707 aaKnown RBP13.34□□□□□ -0.27
APEX1-212ENST00000556054 RMND1Q9NWS8 449 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 KCNG1Q9UIX4 513 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 PCDHA5Q9Y5H7 936 aa13.34□□□□□ -0.27
APEX1-212ENST00000556054 IGKV6-21A0A0C4DH24 114 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 MAGEB2O15479 319 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 KLRC4O43908 158 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 MAFO75444 373 aaPredicted RBP13.33□□□□□ -0.28
APEX1-212ENST00000556054 RTP1P59025 263 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 PSMD2Q13200 908 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 PNOCQ13519 176 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 CUL4BQ13620 913 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 GIT2Q14161 759 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 LRRC41Q15345 812 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 CAMK4Q16566 473 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 ZSCAN23Q3MJ62 389 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 UNC13DQ70J99 1090 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 TRIM50Q86XT4 487 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 TNS4Q8IZW8 715 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 LENG1Q96BZ8 264 aaPredicted RBP13.33□□□□□ -0.28
APEX1-212ENST00000556054 ZNF333Q96JL9 665 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 UNC93B1Q9H1C4 597 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 RNPEPQ9H4A4 650 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 C17orf75Q9HAS0 396 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 SEL1LQ9UBV2 794 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 SEPT9Q9UHD8 586 aaPredicted RBP13.33□□□□□ -0.28
APEX1-212ENST00000556054 OGDHLQ9ULD0 1010 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 NRCAMQ92823 1304 aa13.33□□□□□ -0.28
APEX1-212ENST00000556054 A0A087WWV3 80 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 ZBTB42B2RXF5 422 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 RHOBTB3O94955 611 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 PGK1P00558 417 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 RPN1P04843 607 aaKnown RBP13.32□□□□□ -0.28
APEX1-212ENST00000556054 SSBP05455 408 aaKnown RBP eCLIP13.32□□□□□ -0.28
APEX1-212ENST00000556054 ZNF286BP0CG31 522 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 CCL5P13501 91 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 GAP43P17677 238 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 SCP2P22307 547 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 HOXC8P31273 242 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 PSEN2P49810 448 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 ZNF131P52739 623 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 NPEPPSP55786 919 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 ZNF445P59923 1031 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 BEX3Q00994 111 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 EHHADHQ08426 723 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 MFSD10Q14728 455 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 CT47A1Q5JQC4 288 aaPredicted RBP13.32□□□□□ -0.28
APEX1-212ENST00000556054 SESTD1Q86VW0 696 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 CCDC65Q8IXS2 484 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 GRAMD1CQ8IYS0 662 aa13.32□□□□□ -0.28
APEX1-212ENST00000556054 STAMQ92783 540 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms